Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MIR3688-2-201ENST00000636963 87 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 RNU5B-2P-201ENST00000363036 113 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 Y_RNA.99-201ENST00000363138 105 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 Y_RNA.135-201ENST00000363439 95 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 U3.9-201ENST00000363823 204 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 SNORA29-201ENST00000384183 140 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 RNU6-1106P-201ENST00000390845 107 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 SNORA12.2-201ENST00000391040 156 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 MIR1304-201ENST00000408243 91 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 AC012306.1-201ENST00000423267 114 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 MTND1P11-201ENST00000456661 876 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 U8.21-201ENST00000459536 136 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 MTCO1P29-201ENST00000496868 288 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 RNU6-718P-201ENST00000516166 105 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 AP005660.1-201ENST00000522972 293 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 MIR3672-201ENST00000584290 82 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 AL133215.3-201ENST00000609801 448 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 uc_338.5-201ENST00000611839 155 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 U4.5-201ENST00000617137 123 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 AC139792.2-201ENST00000624218 587 ntBASIC1.61□□□□□ -2.15
SMIM28A0A1B0GU29 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 SNORD114-6-201ENST00000364393 72 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 RNU4-56P-201ENST00000364700 142 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 Y_RNA.295-201ENST00000364918 102 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 RNU6-26P-201ENST00000383985 107 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 Y_RNA.414-201ENST00000384011 101 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 Y_RNA.530-201ENST00000384587 101 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 MIR29C-201ENST00000385231 88 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 MIR549A-201ENST00000385268 96 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 FGF7P8-201ENST00000402994 292 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 RPL23AP36-201ENST00000413895 458 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 Z82205.1-201ENST00000428456 297 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 HMGN2P18-201ENST00000450680 270 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 AC011352.1-201ENST00000512300 793 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 RNU6-1098P-201ENST00000516772 96 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 AC026371.1-201ENST00000551867 419 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 EIF4A1P12-201ENST00000551910 141 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 SUB1P3-201ENST00000564581 315 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 AL590240.4-201ENST00000616908 390 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 AC022513.1-201ENST00000624512 117 ntBASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
SMIM28A0A1B0GU29 RNU1-58P-201ENST00000362413 163 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 Y_RNA.151-201ENST00000363566 112 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 Y_RNA.212-201ENST00000364177 102 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 Y_RNA.332-201ENST00000365271 113 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 RNU6-1286P-201ENST00000383871 107 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 MIR521-1-201ENST00000384902 87 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 MIR487A-201ENST00000385009 80 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 AL354695.1-201ENST00000427935 228 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 UBE2V1P8-201ENST00000437166 265 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 HMGB1P18-201ENST00000438801 619 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 TOMM22P6-201ENST00000465035 409 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 AC092989.1-201ENST00000481235 277 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 AC096745.1-201ENST00000509945 370 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 AC108729.3-201ENST00000513484 108 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 RNU6-256P-201ENST00000516747 97 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 RNU6-1314P-201ENST00000517139 104 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 AL773524.1-201ENST00000614065 229 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 MIR3662-201ENST00000637030 95 ntBASIC1.59□□□□□ -2.15
SMIM28A0A1B0GU29 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
SMIM28A0A1B0GU29 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 RNU1-76P-201ENST00000362903 159 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 Y_RNA.100-201ENST00000363141 102 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-128P-201ENST00000383976 107 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 RNA5SP465-201ENST00000391195 109 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AL033519.2-201ENST00000403958 392 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AL357139.1-201ENST00000407792 426 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AC244636.1-201ENST00000421152 228 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 MTND2P29-201ENST00000438595 412 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AC079354.2-201ENST00000453523 154 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-567P-201ENST00000516746 107 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AC087441.2-201ENST00000529141 262 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AC090517.1-201ENST00000569307 266 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 MIR3169-201ENST00000578032 83 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AC016727.2-201ENST00000603988 621 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms