Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SNORD32A-201ENST00000364805 84 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 Y_RNA.416-201ENST00000384014 113 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 AC099548.1-201ENST00000421443 426 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 AC087499.2-201ENST00000432861 149 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 AL135938.1-201ENST00000443141 297 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 AC012308.1-201ENST00000451232 178 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 AF186996.7-201ENST00000492781 209 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 RNU6-1012P-201ENST00000516606 109 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 AC023824.2-201ENST00000566185 400 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 MIR4659A-201ENST00000580269 81 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 AL109918.3-201ENST00000603072 338 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 ADAM3A-203ENST00000461344 2157 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 MIR148B-201ENST00000362252 99 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 RNU6-879P-201ENST00000364328 108 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 Y_RNA.237-201ENST00000364439 102 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 RNU6-1180P-201ENST00000364935 107 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 SNORA29-201ENST00000384183 140 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 Y_RNA.504-201ENST00000384481 104 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 RNU6-541P-201ENST00000384709 110 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 MIR544A-201ENST00000384855 91 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 AL079342.1-201ENST00000401460 267 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 AC004383.1-201ENST00000438135 289 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 AC105272.1-201ENST00000438604 198 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 AC007969.2-201ENST00000441891 191 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 AC016700.2-201ENST00000446011 156 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 RN7SL633P-201ENST00000488974 297 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 RPL23AP94-201ENST00000512518 302 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 RNA5SP356-201ENST00000515972 94 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 RNU6-581P-201ENST00000516214 105 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 RNU6-111P-201ENST00000517179 105 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 DEFB108E-201ENST00000524692 240 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 AC011476.5-201ENST00000615594 130 ntBASIC3.37□□□□□ -1.87
CTDP1Q9Y5B0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 MAPK10-266ENST00000641066 6555 ntBASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 MIR335-201ENST00000362173 94 ntBASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 Y_RNA.20-201ENST00000362479 113 ntBASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 SNORD81.1-201ENST00000363064 77 ntBASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 RNU2-20P-201ENST00000410425 191 ntBASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 AL139281.1-201ENST00000422120 335 ntBASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 RPL23AP95-201ENST00000426806 265 ntBASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 HMGN2P10-201ENST00000448085 265 ntBASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 AP000870.1-201ENST00000472927 406 ntBASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 RPL31P41-201ENST00000477967 372 ntBASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 SNORA31.6-201ENST00000516241 130 ntBASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 RN7SKP40-201ENST00000517211 242 ntBASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 HSPE1P4-201ENST00000550617 308 ntBASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 AC009163.5-201ENST00000575421 637 ntBASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 AC137590.2-201ENST00000619709 240 ntBASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 AC096644.4-201ENST00000563417 2912 ntBASIC3.36□□□□□ -1.87
CTDP1Q9Y5B0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 SNORA51.4-201ENST00000364993 124 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 RNU6-926P-201ENST00000384075 107 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 MRPL35P1-201ENST00000404272 572 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 Y_RNA.602-201ENST00000410535 92 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 RNU2-64P-201ENST00000411315 191 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 RPS15AP7-201ENST00000439294 405 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 GPM6BP3-201ENST00000442797 145 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 MED28P2-201ENST00000475771 317 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 RNU6-1114P-201ENST00000516022 107 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 AC016256.1-201ENST00000547971 354 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 AC021739.1-201ENST00000559631 174 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 RPL12P50-201ENST00000603116 116 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 UCA1.1-201ENST00000620952 75 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 SNORA43.4-201ENST00000629559 138 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 MIR3529-201ENST00000637713 78 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTDP1Q9Y5B0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 AC110491.1-201ENST00000562191 2010 ntBASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 Y_RNA.54-201ENST00000362766 105 ntBASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 RNU1-109P-201ENST00000383960 147 ntBASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 SNORA18.3-201ENST00000384122 132 ntBASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 RNU6-937P-201ENST00000384325 106 ntBASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 RNU1-139P-201ENST00000391307 165 ntBASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 BPY2DP-201ENST00000422208 265 ntBASIC3.34□□□□□ -1.87
CTDP1Q9Y5B0 EIF1P2-201ENST00000428233 350 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms