Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RN7SKP210-201ENST00000459176 261 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 HMGN1P10-201ENST00000474557 553 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 RPL36AP48-201ENST00000485521 314 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 AC016632.1-201ENST00000503994 196 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 SNORA25.10-201ENST00000515926 124 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 AC005034.5-201ENST00000604219 466 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 SNORD58B-201ENST00000607313 66 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 AL355802.3-201ENST00000607571 545 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 AC046143.2-201ENST00000609789 160 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 AL159153.1-201ENST00000619688 317 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 AC007792.1-201ENST00000623023 402 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 AC091812.1-201ENST00000432235 1948 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 AL136360.1-201ENST00000503377 1900 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 RNU4-42P-201ENST00000364738 142 ntBASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 MIR32-201ENST00000384965 70 ntBASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 MIR487A-201ENST00000385009 80 ntBASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 AL359511.1-201ENST00000402970 211 ntBASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 AC007098.1-201ENST00000420122 367 ntBASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 AC018634.1-201ENST00000437554 401 ntBASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 OR2AQ1P-201ENST00000451972 200 ntBASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 RPS3P1-201ENST00000456781 192 ntBASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 snoU13.6-201ENST00000458785 104 ntBASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 snoU13.30-201ENST00000458951 104 ntBASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 AC087477.1-201ENST00000465747 340 ntBASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 AL078605.1-201ENST00000603529 500 ntBASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 AC096772.1-201ENST00000609146 564 ntBASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 MIR6852-201ENST00000621699 66 ntBASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 AL109809.4-201ENST00000603520 2185 ntBASIC2.43□□□□□ -2.02
SMARCAL1Q9NZC9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 AC002543.1-201ENST00000299783 1954 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 RNU6-1010P-201ENST00000362757 107 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 RNU5B-2P-201ENST00000363036 113 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 RNU4-9P-201ENST00000364951 139 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 RNU1-115P-201ENST00000365329 160 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 RNU6-142P-201ENST00000384019 107 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 Y_RNA.422-201ENST00000384054 114 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 Y_RNA.527-201ENST00000384573 102 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 MIR625-201ENST00000385047 85 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 Y_RNA.645-201ENST00000391229 102 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 Y_RNA.605-201ENST00000410577 105 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 AL590135.1-201ENST00000422215 156 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 AC019205.3-201ENST00000424573 156 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 AC078809.1-201ENST00000427601 140 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 AC016700.2-201ENST00000446011 156 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 RNU7-87P-201ENST00000459343 62 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 UBE2DNL-203ENST00000474922 222 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 AC015911.1-201ENST00000495111 156 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 RNU7-175P-201ENST00000515915 61 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 RNU5F-2P-201ENST00000516066 82 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 AC027176.1-201ENST00000560204 514 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 AC104581.2-201ENST00000572227 430 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 MIR5571-201ENST00000577998 113 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 MIR4680-201ENST00000580906 66 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 MIR4658-201ENST00000584344 65 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 MIR4298-201ENST00000584380 73 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 7SK.7-201ENST00000603504 247 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 AC006023.1-201ENST00000603944 259 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 AC104695.3-201ENST00000604052 296 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 uc_338.14-201ENST00000613162 166 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 AC138305.3-201ENST00000624988 240 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 MIR1291-201ENST00000627649 87 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 SCARNA4-201ENST00000629045 128 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 AL606534.2-204ENST00000635008 178 ntBASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SMARCAL1Q9NZC9 AC092268.1-201ENST00000342691 405 ntBASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 Y_RNA.39-201ENST00000362620 98 ntBASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 Y_RNA.158-201ENST00000363651 101 ntBASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 Y_RNA.510-201ENST00000384511 114 ntBASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 MIR190B-201ENST00000401119 79 ntBASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 AC104435.1-201ENST00000483483 166 ntBASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 HSBP1P1-201ENST00000555205 166 ntBASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 MIR3162-201ENST00000581818 82 ntBASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 AC008737.2-201ENST00000599446 118 ntBASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 AC103810.6-201ENST00000606708 136 ntBASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 AL132822.1-201ENST00000617063 513 ntBASIC2.41□□□□□ -2.02
SMARCAL1Q9NZC9 AL162373.1-201ENST00000620433 407 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms