Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 SNORA51.11-201ENST00000384442 131 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 Y_RNA.529-201ENST00000384586 119 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 RNU6-310P-201ENST00000384655 107 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 MIR518A2-201ENST00000384966 87 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 Y_RNA.646-201ENST00000410980 101 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 WARS2P1-201ENST00000429678 537 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 AL353997.1-201ENST00000432936 108 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 S100A11P2-201ENST00000467589 312 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 RNU7-175P-201ENST00000515915 61 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 RNU6-559P-201ENST00000516151 98 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 SNORA70.24-201ENST00000517233 118 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 AP000889.1-201ENST00000530968 660 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 ANP32BP3-201ENST00000559213 706 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 AC026470.2-201ENST00000561492 181 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 FRG2DP-202ENST00000566967 323 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 TCL6_2.1-201ENST00000615162 119 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 MIR1302-1-201ENST00000637932 143 ntBASIC2.09□□□□□ -2.07
CHMP1AQ9HD42 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
CHMP1AQ9HD42 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.09□□□□□ -2.08
CHMP1AQ9HD42 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CHMP1AQ9HD42 RNY1P16-201ENST00000363063 111 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 Y_RNA.99-201ENST00000363138 105 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 RNA5SP387-201ENST00000364226 106 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 SNORA16B-201ENST00000364674 135 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 Y_RNA.319-201ENST00000365138 92 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 RNU1-51P-201ENST00000365345 176 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 RN7SKP284-201ENST00000411002 343 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 AL356379.1-201ENST00000414105 126 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 AL445305.1-201ENST00000432577 575 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 SNRPEP8-201ENST00000442866 260 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 AC093019.1-201ENST00000443135 252 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 SNORD109B-201ENST00000458961 67 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 SNORD109A-201ENST00000459128 67 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 AC090255.1-201ENST00000495779 349 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 MIR5006-201ENST00000583027 110 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 ELOCP29-201ENST00000588193 334 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 AL355802.3-201ENST00000607571 545 ntBASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CHMP1AQ9HD42 RNU6-545P-201ENST00000362681 104 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 SNORD31B-201ENST00000364977 69 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 Y_RNA.387-201ENST00000383918 102 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 SNORD116-29-201ENST00000384516 83 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 SNORA41-201ENST00000384675 132 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 AC123900.1-201ENST00000420390 96 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 BX510359.4-201ENST00000423750 193 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 AC016925.1-201ENST00000458303 298 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 AC055731.1-201ENST00000474387 401 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 AC097473.1-201ENST00000508142 408 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 RNU6-120P-201ENST00000516077 103 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 RNA5SP54-201ENST00000516951 92 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 AC134698.4-201ENST00000523451 826 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 AC087441.2-201ENST00000529141 262 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 AL355375.2-201ENST00000574825 175 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 MIR5690-201ENST00000583739 73 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 7SK.7-201ENST00000603504 247 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 SNRPGP20-201ENST00000604477 205 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 U4.3-201ENST00000621047 82 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 MTND4LP32-201ENST00000636111 270 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 AC112487.2-201ENST00000637950 304 ntBASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.07□□□□□ -2.08
CHMP1AQ9HD42 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CHMP1AQ9HD42 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CHMP1AQ9HD42 MIRLET7G-201ENST00000362280 84 ntBASIC2.06□□□□□ -2.08
CHMP1AQ9HD42 RNU6-874P-201ENST00000362390 105 ntBASIC2.06□□□□□ -2.08
CHMP1AQ9HD42 RNU6-525P-201ENST00000363685 104 ntBASIC2.06□□□□□ -2.08
CHMP1AQ9HD42 RNA5SP456-201ENST00000364002 114 ntBASIC2.06□□□□□ -2.08
CHMP1AQ9HD42 SNORD114-6-201ENST00000364393 72 ntBASIC2.06□□□□□ -2.08
CHMP1AQ9HD42 Y_RNA.356-201ENST00000365475 113 ntBASIC2.06□□□□□ -2.08
CHMP1AQ9HD42 MIR29C-201ENST00000385231 88 ntBASIC2.06□□□□□ -2.08
CHMP1AQ9HD42 RNU6-159P-201ENST00000391080 106 ntBASIC2.06□□□□□ -2.08
CHMP1AQ9HD42 MIR1283-2-201ENST00000408621 87 ntBASIC2.06□□□□□ -2.08
CHMP1AQ9HD42 AC096664.2-201ENST00000411843 406 ntBASIC2.06□□□□□ -2.08
CHMP1AQ9HD42 MTND3P23-201ENST00000431980 347 ntBASIC2.06□□□□□ -2.08
CHMP1AQ9HD42 AC009237.7-201ENST00000447357 229 ntBASIC2.06□□□□□ -2.08
CHMP1AQ9HD42 MTCO3P10-201ENST00000455912 772 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms