Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 TCL6_2.1-201ENST00000615162 119 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AC073544.1-201ENST00000600110 1595 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-534P-201ENST00000364877 106 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-116P-201ENST00000384042 109 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-692P-201ENST00000384496 107 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-417P-201ENST00000384712 107 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AC006461.1-201ENST00000412637 326 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AC073614.1-201ENST00000438690 650 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 RPL39P39-201ENST00000455840 151 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AC016256.1-201ENST00000547971 354 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 MIR5697-201ENST00000578045 78 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 MTND3P19-201ENST00000603825 345 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 SNRPGP20-201ENST00000604477 205 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AL356157.2-201ENST00000605122 111 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AC009994.1-201ENST00000606889 253 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AL139022.2-201ENST00000606934 443 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 PCGEM1.1-201ENST00000613431 131 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AC005520.5-201ENST00000613926 164 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 MTCO2P21-201ENST00000419780 677 ntBASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 MTND1P32-201ENST00000433043 938 ntBASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 SNAP23P1-201ENST00000433229 246 ntBASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 HMGN2P34-201ENST00000437647 269 ntBASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 AC010486.2-201ENST00000505572 483 ntBASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 MTATP6P15-201ENST00000527233 835 ntBASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 MIR4307-201ENST00000582802 84 ntBASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 AL513534.2-201ENST00000603836 250 ntBASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 MIR8087-201ENST00000612745 78 ntBASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 AC009509.4-201ENST00000619202 509 ntBASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.35□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-190P-201ENST00000384154 102 ntBASIC0.34□□□□□ -2.35
KIAA1549Q9HCM3 SNORA26.3-201ENST00000391119 136 ntBASIC0.34□□□□□ -2.35
KIAA1549Q9HCM3 AC019070.1-201ENST00000415008 1024 ntBASIC0.34□□□□□ -2.35
KIAA1549Q9HCM3 AC011233.1-201ENST00000422812 283 ntBASIC0.34□□□□□ -2.35
KIAA1549Q9HCM3 SNORD124-201ENST00000459577 104 ntBASIC0.34□□□□□ -2.35
KIAA1549Q9HCM3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.34□□□□□ -2.35
KIAA1549Q9HCM3 AC016632.1-201ENST00000503994 196 ntBASIC0.34□□□□□ -2.35
KIAA1549Q9HCM3 SNORD79.1-201ENST00000516069 84 ntBASIC0.34□□□□□ -2.35
KIAA1549Q9HCM3 AC105185.1-201ENST00000518705 535 ntBASIC0.34□□□□□ -2.35
KIAA1549Q9HCM3 AL590705.4-201ENST00000532209 134 ntBASIC0.34□□□□□ -2.35
KIAA1549Q9HCM3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.34□□□□□ -2.35
KIAA1549Q9HCM3 AL929325.1-201ENST00000603096 117 ntBASIC0.34□□□□□ -2.35
KIAA1549Q9HCM3 AC012557.2-201ENST00000605919 418 ntBASIC0.34□□□□□ -2.35
KIAA1549Q9HCM3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.34□□□□□ -2.35
KIAA1549Q9HCM3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.34□□□□□ -2.35
KIAA1549Q9HCM3 U3.8-201ENST00000363675 217 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 RNU4-12P-201ENST00000365233 139 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 SNORA32.2-201ENST00000384049 122 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 RNU6-1257P-201ENST00000384625 110 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 RNU6-331P-201ENST00000384724 107 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 RNU6-1106P-201ENST00000390845 107 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 MRPL42P2-201ENST00000403169 426 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 AC010154.1-201ENST00000425857 269 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 AL356583.2-201ENST00000426536 280 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 AC013470.1-201ENST00000453438 462 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 USP9YP25-201ENST00000457708 443 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 AK3P2-201ENST00000507976 429 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 RNU6-947P-201ENST00000516264 106 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 RNU6-856P-201ENST00000516959 98 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 AC109810.1-201ENST00000534066 224 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 MIR5006-201ENST00000583027 110 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 AL357312.1-201ENST00000603879 298 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 RPL17P51-201ENST00000605218 238 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 AC013244.3-201ENST00000605614 388 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 AC008250.2-201ENST00000615261 205 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 AC126177.8-201ENST00000618339 1015 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 AL049777.1-201ENST00000622740 518 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 MTND4P14-201ENST00000435799 1354 ntBASIC0.34□□□□□ -2.36
KIAA1549Q9HCM3 RNU6-545P-201ENST00000362681 104 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 RNY4P16-201ENST00000364768 94 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 SNORD32A-201ENST00000364805 84 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 RNU6-418P-201ENST00000384035 107 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 RNU1-119P-201ENST00000391122 165 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 AL590135.1-201ENST00000422215 156 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 AC019205.3-201ENST00000424573 156 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 AC016700.2-201ENST00000446011 156 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 MTCYBP1-201ENST00000454315 1119 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 SRRM1P2-201ENST00000464531 1192 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 AC015911.1-201ENST00000495111 156 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 RNU6-123P-201ENST00000516163 102 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 AC023050.3-201ENST00000541142 333 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 AC005771.1-201ENST00000585581 349 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 AC008521.1-201ENST00000587471 187 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 BCRP9-201ENST00000605312 388 ntBASIC0.33□□□□□ -2.36
KIAA1549Q9HCM3 AL451064.1-201ENST00000607718 471 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms