Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 MTND3P16-201ENST00000452205 344 ntBASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 RNU1-98P-201ENST00000458992 160 ntBASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 ATP5EP1-201ENST00000510257 156 ntBASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 RNVU1-2-201ENST00000516326 135 ntBASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 Y_RNA.704-201ENST00000516851 102 ntBASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 RNU6-835P-201ENST00000516974 104 ntBASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 Z98751.3-201ENST00000604447 521 ntBASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 RMST_6.1-201ENST00000611980 203 ntBASIC1.74□□□□□ -2.13
RPAP3Q9H6T3 AC009541.1-201ENST00000438279 2662 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 RNU6-23P-201ENST00000363283 107 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 RNU6-1085P-201ENST00000363576 107 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 RNA5SP493-201ENST00000364115 91 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 RNU4-75P-201ENST00000364621 146 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 MIR30A-201ENST00000385092 71 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 RNU6-1068P-201ENST00000410958 103 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 AL354695.1-201ENST00000427935 228 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 TIMM9P3-201ENST00000428659 274 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 Z83846.1-201ENST00000446798 265 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 PPP1R2P5-201ENST00000457256 603 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 snoU13.6-201ENST00000458785 104 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 RNU6-1037P-201ENST00000459571 107 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 AC021146.2-201ENST00000504736 556 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 AC087854.1-201ENST00000519706 414 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 MIR4421-201ENST00000578133 69 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 MIR5692C1-201ENST00000585309 91 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 AC073534.2-201ENST00000620377 381 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 AC130454.1-201ENST00000622948 401 ntBASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.73□□□□□ -2.13
RPAP3Q9H6T3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 U3.9-201ENST00000363823 204 ntBASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 Y_RNA.332-201ENST00000365271 113 ntBASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 Y_RNA.372-201ENST00000365599 102 ntBASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 RNU6-160P-201ENST00000384591 107 ntBASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 SNORA12.2-201ENST00000391040 156 ntBASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 RNU6-648P-201ENST00000410190 107 ntBASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 DLGAP5P1-201ENST00000430307 464 ntBASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 AC112492.4-201ENST00000456549 352 ntBASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 Y_RNA.654-201ENST00000497848 106 ntBASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 AC107401.1-201ENST00000503426 685 ntBASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 RNU6-612P-201ENST00000516909 102 ntBASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 AL512360.1-201ENST00000555346 234 ntBASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 AC021231.3-201ENST00000558497 370 ntBASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 CYP4A27P-201ENST00000567218 190 ntBASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 AC092807.2-201ENST00000609367 243 ntBASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 AL359880.1-201ENST00000621879 266 ntBASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.72□□□□□ -2.13
RPAP3Q9H6T3 RNU6-1317P-201ENST00000364582 104 ntBASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 MIR549A-201ENST00000385268 96 ntBASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 MIR208B-201ENST00000401172 77 ntBASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 RNU2-16P-201ENST00000410712 136 ntBASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 AC009310.1-201ENST00000414414 451 ntBASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 RPL9P9-202ENST00000466501 579 ntBASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 AC083904.1-201ENST00000487828 231 ntBASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 AC093534.1-201ENST00000504977 132 ntBASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 AC091885.1-201ENST00000506658 268 ntBASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 AC005741.1-201ENST00000511094 432 ntBASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 RNU6-1098P-201ENST00000516772 96 ntBASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 EIF4A1P12-201ENST00000551910 141 ntBASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 MIR3169-201ENST00000578032 83 ntBASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 CYP2C61P-201ENST00000604072 290 ntBASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 AC016925.2-201ENST00000605108 242 ntBASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RPAP3Q9H6T3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPAP3Q9H6T3 Y_RNA.167-201ENST00000363735 109 ntBASIC1.7□□□□□ -2.14
RPAP3Q9H6T3 RNU6-392P-201ENST00000364926 101 ntBASIC1.7□□□□□ -2.14
RPAP3Q9H6T3 RNU6-1329P-201ENST00000365664 107 ntBASIC1.7□□□□□ -2.14
RPAP3Q9H6T3 Y_RNA.559-201ENST00000384686 107 ntBASIC1.7□□□□□ -2.14
RPAP3Q9H6T3 MIR1304-201ENST00000408243 91 ntBASIC1.7□□□□□ -2.14
RPAP3Q9H6T3 RN7SKP51-201ENST00000410781 304 ntBASIC1.7□□□□□ -2.14
RPAP3Q9H6T3 MTCO3P41-201ENST00000414801 328 ntBASIC1.7□□□□□ -2.14
RPAP3Q9H6T3 AC016907.1-201ENST00000419483 435 ntBASIC1.7□□□□□ -2.14
RPAP3Q9H6T3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.7□□□□□ -2.14
RPAP3Q9H6T3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.7□□□□□ -2.14
RPAP3Q9H6T3 AL035666.1-201ENST00000446195 348 ntBASIC1.7□□□□□ -2.14
RPAP3Q9H6T3 RNU7-14P-201ENST00000459331 62 ntBASIC1.7□□□□□ -2.14
RPAP3Q9H6T3 RNU6-1208P-201ENST00000459588 107 ntBASIC1.7□□□□□ -2.14
RPAP3Q9H6T3 AC007547.1-201ENST00000462177 490 ntBASIC1.7□□□□□ -2.14
RPAP3Q9H6T3 RPS29P27-201ENST00000463711 170 ntBASIC1.7□□□□□ -2.14
RPAP3Q9H6T3 AC092436.3-201ENST00000511788 257 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms