Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 RNU6-945P-201ENST00000383947 107 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 SNORA75B-201ENST00000384053 137 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 RNU6-1222P-201ENST00000384615 107 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 Y_RNA.551-201ENST00000384661 102 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
TTC28Q96AY4 SNORD89-201ENST00000390981 114 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 MIR513C-201ENST00000401352 84 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 MIR320C1-201ENST00000408566 88 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.19□□□□□ -2.38
TTC28Q96AY4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.19□□□□□ -2.38
TTC28Q96AY4 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.19□□□□□ -2.38
TTC28Q96AY4 AC010468.3-201ENST00000508225 458 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 RNU6-732P-201ENST00000516033 103 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 Y_RNA.695-201ENST00000516715 107 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.19□□□□□ -2.38
TTC28Q96AY4 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.19□□□□□ -2.38
TTC28Q96AY4 AC023538.1-201ENST00000534576 736 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 AL121579.1-201ENST00000555129 305 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 AL512347.1-201ENST00000566420 503 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 MIR4293-201ENST00000584305 78 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 VTRNA2-1-201ENST00000602301 127 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.19□□□□□ -2.38
TTC28Q96AY4 MIR6129-201ENST00000616087 109 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 Y_RNA.2-201ENST00000362330 96 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 RNA5SP214-201ENST00000363378 118 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 Y_RNA.256-201ENST00000364594 104 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 RNU6-312P-201ENST00000364629 107 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 Y_RNA.315-201ENST00000365117 102 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 Y_RNA.534-201ENST00000384599 112 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 MIR548B-201ENST00000385247 97 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.18□□□□□ -2.38
TTC28Q96AY4 SNORD99-201ENST00000408612 74 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 AC003071.1-201ENST00000451219 789 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 AC016925.1-201ENST00000458303 298 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 AC048334.1-201ENST00000477975 159 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.18□□□□□ -2.38
TTC28Q96AY4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.18□□□□□ -2.38
TTC28Q96AY4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.18□□□□□ -2.38
TTC28Q96AY4 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.18□□□□□ -2.38
TTC28Q96AY4 MTCYBP33-201ENST00000575007 1130 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 MTCO2P2-201ENST00000591258 225 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 AC022432.1-201ENST00000595739 310 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 AL353765.1-201ENST00000605514 183 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 AL355816.2-201ENST00000610049 647 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 AC093913.1-201ENST00000614178 329 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 RNU6-395P-201ENST00000365662 106 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 RNU6-622P-201ENST00000384272 103 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 RNU6-505P-201ENST00000384427 107 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 Y_RNA.529-201ENST00000384586 119 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 RNU6-883P-201ENST00000384597 107 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 AC114878.1-201ENST00000441166 358 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 GXYLT1P1-201ENST00000446657 490 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 RPL7P55-201ENST00000450522 746 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 RPL37P6-201ENST00000460682 294 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.18□□□□□ -2.38
TTC28Q96AY4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.18□□□□□ -2.38
TTC28Q96AY4 DPPA3P3-201ENST00000603842 430 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 AL022154.1-201ENST00000604698 785 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 RNU6-87P-201ENST00000607561 108 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 Y_RNA.812-201ENST00000610788 101 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 PART1_2.1-201ENST00000612397 250 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 Y_RNA.784-201ENST00000613803 101 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 AC130324.3-201ENST00000614165 542 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 Y_RNA.787-201ENST00000616522 101 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 RMST_4.1-201ENST00000616886 107 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 Y_RNA.780-201ENST00000617336 101 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 Y_RNA.801-201ENST00000619005 101 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 AC136475.10-201ENST00000620253 385 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 PCMTD1P7-201ENST00000634506 357 ntBASIC0.18□□□□□ -2.38
TTC28Q96AY4 Y_RNA.33-201ENST00000362591 102 ntBASIC0.17□□□□□ -2.38
TTC28Q96AY4 RNU5B-1-201ENST00000363286 116 ntBASIC0.17□□□□□ -2.38
TTC28Q96AY4 RNU6-621P-201ENST00000364752 109 ntBASIC0.17□□□□□ -2.38
TTC28Q96AY4 RNA5SP259-201ENST00000365541 109 ntBASIC0.17□□□□□ -2.38
TTC28Q96AY4 SNORD75.1-201ENST00000408373 60 ntBASIC0.17□□□□□ -2.38
TTC28Q96AY4 MIR1185-1-201ENST00000408598 86 ntBASIC0.17□□□□□ -2.38
TTC28Q96AY4 MTCO1P21-201ENST00000416634 589 ntBASIC0.17□□□□□ -2.38
TTC28Q96AY4 COX6CP10-201ENST00000416832 224 ntBASIC0.17□□□□□ -2.38
TTC28Q96AY4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.17□□□□□ -2.38
TTC28Q96AY4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.17□□□□□ -2.38
TTC28Q96AY4 LARP1BP3-201ENST00000437229 869 ntBASIC0.17□□□□□ -2.38
TTC28Q96AY4 AC245047.7-201ENST00000440265 293 ntBASIC0.17□□□□□ -2.38
TTC28Q96AY4 AL158053.1-201ENST00000441503 453 ntBASIC0.17□□□□□ -2.38
TTC28Q96AY4 AC104629.1-201ENST00000494226 508 ntBASIC0.17□□□□□ -2.38
TTC28Q96AY4 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.17□□□□□ -2.38
TTC28Q96AY4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.17□□□□□ -2.38
TTC28Q96AY4 AL132657.2-201ENST00000564417 358 ntBASIC0.17□□□□□ -2.38
TTC28Q96AY4 AC099654.8-201ENST00000637757 681 ntBASIC0.17□□□□□ -2.38
TTC28Q96AY4 MTND4P14-201ENST00000435799 1354 ntBASIC0.17□□□□□ -2.38
TTC28Q96AY4 AC092268.1-201ENST00000342691 405 ntBASIC0.16□□□□□ -2.38
TTC28Q96AY4 Y_RNA.145-201ENST00000363527 102 ntBASIC0.16□□□□□ -2.38
TTC28Q96AY4 RNU6-468P-201ENST00000384003 109 ntBASIC0.16□□□□□ -2.38
TTC28Q96AY4 AL953862.1-201ENST00000423016 168 ntBASIC0.16□□□□□ -2.38
TTC28Q96AY4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.16□□□□□ -2.38
TTC28Q96AY4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.16□□□□□ -2.38
TTC28Q96AY4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.16□□□□□ -2.38
TTC28Q96AY4 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.16□□□□□ -2.38
TTC28Q96AY4 HMGN1P12-201ENST00000499125 195 ntBASIC0.16□□□□□ -2.38
TTC28Q96AY4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.16□□□□□ -2.38
TTC28Q96AY4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.16□□□□□ -2.38
TTC28Q96AY4 SUMO2P16-201ENST00000519475 264 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms