Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RNU6-42P-201ENST00000384165 107 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-36P-201ENST00000384172 107 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-4P-201ENST00000384205 107 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-5P-201ENST00000384238 107 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-3P-201ENST00000384314 107 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-2-201ENST00000384627 107 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-9-201ENST00000384776 107 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-33P-201ENST00000384793 107 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 RNA5SP496-201ENST00000391240 109 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 MRPL42P3-201ENST00000401492 326 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 VPS26BP1-201ENST00000417155 755 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 MTCO2P34-201ENST00000421994 607 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 ISCA1P6-201ENST00000427740 390 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 AC010975.2-201ENST00000427781 588 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 AC073261.1-201ENST00000429409 121 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 AL445305.1-201ENST00000432577 575 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 AC093019.1-201ENST00000443135 252 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 AL360271.2-201ENST00000447710 161 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 AC067940.1-201ENST00000458411 300 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-948P-201ENST00000516374 107 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 AC004584.2-201ENST00000570407 410 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 MIR4498-201ENST00000577599 66 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 MIR4514-201ENST00000581410 57 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 VN1R87P-201ENST00000596706 487 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-6P-201ENST00000606623 107 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-94P-201ENST00000607728 107 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 AC007014.2-201ENST00000615581 479 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 AL031667.3-201ENST00000620124 655 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 AC093875.1-201ENST00000623688 504 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 MIR18A-201ENST00000362310 71 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-527P-201ENST00000363425 104 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 SNORD114-23-201ENST00000363536 72 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 RNA5SP193-201ENST00000410353 107 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 AC245047.3-201ENST00000429428 127 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 RPL23AP30-201ENST00000432419 501 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 AC116347.2-201ENST00000514912 523 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-1223P-201ENST00000517124 104 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 DEFB130C-202ENST00000530001 230 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 AC141557.1-201ENST00000540982 400 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 MIR3678-201ENST00000578455 94 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 MIR3192-201ENST00000584920 77 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 AC099785.1-201ENST00000605697 437 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 AC104458.1-201ENST00000608243 463 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 AL359547.2-201ENST00000615810 418 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 AC015726.2-201ENST00000620112 122 ntBASIC-0.27□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-562P-201ENST00000362731 107 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 snoZ40.1-201ENST00000364540 72 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 MIR1284-201ENST00000408337 120 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 RNU2-70P-201ENST00000410718 179 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 ELOCP17-201ENST00000414751 326 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 AL354692.1-201ENST00000423044 315 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 AC025465.4-201ENST00000513422 638 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 AF235103.2-201ENST00000525753 346 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 AC036111.3-201ENST00000526389 112 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 AP002453.2-201ENST00000533503 320 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 AC234772.3-201ENST00000602277 528 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 DEFB131E-202ENST00000602581 683 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 AC146944.4-201ENST00000602697 718 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 AC078795.3-201ENST00000602913 472 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 AL450472.1-202ENST00000637286 180 ntBASIC-0.28□□□□□ -2.45
SPTSSBQ8NFR3 SNORD32A-201ENST00000364805 84 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 SNORD114-22-201ENST00000365423 72 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-975P-201ENST00000384296 105 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 MIR320C1-201ENST00000408566 88 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 MIR1185-1-201ENST00000408598 86 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 SNORA40.8-201ENST00000411034 126 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-57P-201ENST00000411348 103 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 MTND3P17-201ENST00000416968 344 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 RPL23AP94-201ENST00000512518 302 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 SNORD111.1-201ENST00000516421 86 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 AC090517.1-201ENST00000569307 266 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 AL391840.1-201ENST00000571144 367 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 MIR4524B-201ENST00000581569 115 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 AC104408.1-201ENST00000605241 170 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms