Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.15□□□□□ -1.91
PRPF38AQ8NAV1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.91
PRPF38AQ8NAV1 BX322639.1-202ENST00000423987 2213 ntBASIC3.15□□□□□ -1.91
PRPF38AQ8NAV1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 RNU4-82P-201ENST00000362443 140 ntBASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 RNA5SP126-201ENST00000365092 109 ntBASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 RNU6-26P-201ENST00000383985 107 ntBASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 USP9YP16-201ENST00000430287 407 ntBASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 RPS29P6-201ENST00000438196 145 ntBASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 USP9YP23-201ENST00000455085 407 ntBASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 AC003982.1-202ENST00000469928 248 ntBASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 RNU6-58P-201ENST00000517143 103 ntBASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 AC022616.8-201ENST00000533569 253 ntBASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 AC090517.1-201ENST00000569307 266 ntBASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PRPF38AQ8NAV1 Y_RNA.112-201ENST00000363250 102 ntBASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 Y_RNA.128-201ENST00000363391 112 ntBASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 Y_RNA.314-201ENST00000365114 102 ntBASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 RNU6-245P-201ENST00000384020 107 ntBASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 RNU6-301P-201ENST00000384277 107 ntBASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 RNU2-32P-201ENST00000411193 191 ntBASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 ANXA2P1-201ENST00000505539 926 ntBASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 RNU6-1114P-201ENST00000516022 107 ntBASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 SNRPGP18-201ENST00000553000 214 ntBASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 AC090617.3-201ENST00000573670 475 ntBASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 AC005562.2-201ENST00000618264 111 ntBASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 AL138825.1-201ENST00000618587 192 ntBASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 AC134503.1-201ENST00000633048 54 ntBASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 IGHVIII-44-202ENST00000636235 289 ntBASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PRPF38AQ8NAV1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 Y_RNA.106-201ENST00000363189 100 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 RNA5SP68-201ENST00000363885 119 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 Y_RNA.813-201ENST00000364639 102 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 RNU1-115P-201ENST00000365329 160 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 Y_RNA.445-201ENST00000384168 102 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 SNORA69.1-201ENST00000390904 137 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 AL451074.5-201ENST00000415894 435 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 AL035666.1-201ENST00000446195 348 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 RNU7-87P-201ENST00000459343 62 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 RPS27AP9-201ENST00000477681 438 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 RN7SL429P-201ENST00000479090 223 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 AC103975.1-201ENST00000482506 483 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 RN7SL489P-201ENST00000486185 223 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 RN7SL327P-201ENST00000488659 223 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 AC018868.1-201ENST00000491307 315 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 Y_RNA.661-201ENST00000516003 99 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 RNU6-120P-201ENST00000516077 103 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 Y_RNA.701-201ENST00000516812 110 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 AC027288.2-201ENST00000553028 243 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 MIR1244-1-201ENST00000612829 85 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 RN7SL853P-201ENST00000617250 223 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 MIR1244-3-201ENST00000635744 85 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 MIR1244-2-201ENST00000636449 85 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 MIR1244-4-202ENST00000636813 85 ntBASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PRPF38AQ8NAV1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 MIR369-201ENST00000362155 70 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 RNU6-159P-201ENST00000391080 106 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 RNU1-139P-201ENST00000391307 165 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 AL356057.3-201ENST00000402607 340 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 MIR1302-11-201ENST00000408051 138 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 MIR1302-9-201ENST00000408365 138 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 MIR1302-10-201ENST00000408734 138 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 Y_RNA.605-201ENST00000410577 105 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 HMGN2P35-201ENST00000412164 270 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 AC009238.1-201ENST00000442165 424 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 AC009237.6-201ENST00000446969 424 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 Y_RNA.631-201ENST00000459607 101 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 RNU6-965P-201ENST00000516721 96 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 RNU6-826P-201ENST00000516827 104 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 MIR3605-201ENST00000583214 100 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 AC044792.1-201ENST00000593294 196 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 AC016727.2-201ENST00000603988 621 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 MIR1302-2-201ENST00000607096 138 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 TCL6_2.1-201ENST00000615162 119 ntBASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
PRPF38AQ8NAV1 ZNF204P-201ENST00000416749 2397 ntBASIC3.1□□□□□ -1.91
PRPF38AQ8NAV1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms