Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC130509.1-201ENST00000464158 433 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 RPL23AP42-201ENST00000471152 471 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 AC093259.1-201ENST00000509755 300 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 AC107393.1-201ENST00000512403 346 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-991P-201ENST00000516168 107 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-864P-201ENST00000516256 108 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 RNU2-19P-201ENST00000517288 84 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 MTND4LP26-201ENST00000518144 282 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 MRPS36P4-201ENST00000534436 298 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 MIR4529-201ENST00000578110 78 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 FGF7P1-201ENST00000582820 288 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 AC011494.1-201ENST00000596454 237 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 AP003465.2-201ENST00000602571 373 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 AC122108.2-201ENST00000611946 526 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 AC005520.5-201ENST00000613926 164 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 U6atac.1-201ENST00000616025 117 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 AL162373.1-201ENST00000620433 407 ntBASIC1.68□□□□□ -2.14
C9orf40Q8IXQ3 Y_RNA.86-201ENST00000363020 111 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-1286P-201ENST00000383871 107 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-1013P-201ENST00000384180 107 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 SNORD14D-201ENST00000384390 87 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-831P-201ENST00000384548 107 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 MIR518A2-201ENST00000384966 87 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 MIR504-201ENST00000385065 83 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 MIR29C-201ENST00000385231 88 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 AL357139.1-201ENST00000407792 426 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 RNA5SP489-201ENST00000410986 109 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 AL356379.1-201ENST00000414105 126 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 MTND4LP16-201ENST00000440828 295 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 AL353572.1-201ENST00000442490 417 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 AC245102.2-201ENST00000448956 180 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 AC055731.1-201ENST00000474387 401 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 AC069439.1-201ENST00000494739 167 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 AF235103.2-201ENST00000525753 346 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 SNORA59B-202ENST00000578183 701 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 AC018638.8-201ENST00000588755 281 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 AC007229.1-201ENST00000590455 412 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 AC009994.1-201ENST00000606889 253 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 AC092794.1-201ENST00000612734 582 ntBASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
C9orf40Q8IXQ3 RNU5B-2P-201ENST00000363036 113 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-784P-201ENST00000384330 106 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 MIR517A-201ENST00000385001 87 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 RNU6-1093P-201ENST00000391194 107 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 SNORA26.9-201ENST00000391322 122 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 RNA5SP494-201ENST00000410653 129 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 Z82205.1-201ENST00000428456 297 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 AC007677.1-201ENST00000445757 515 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 FGF7P6-202ENST00000451282 293 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 RNA5SP490-201ENST00000517141 136 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 AC090517.1-201ENST00000569307 266 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 POLR3GP2-201ENST00000588366 668 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 AC078899.2-201ENST00000595282 212 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 MIR6715A-201ENST00000615929 79 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 AL359314.1-201ENST00000616913 261 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 AC084768.2-201ENST00000622736 221 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 AC233981.2-201ENST00000611524 1614 ntBASIC1.66□□□□□ -2.14
C9orf40Q8IXQ3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
C9orf40Q8IXQ3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 RNU6-1159P-201ENST00000362933 107 ntBASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 MIR764-201ENST00000390811 85 ntBASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 RNU2-41P-201ENST00000410991 178 ntBASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 CYCSP49-201ENST00000420810 319 ntBASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 DAP3P1-201ENST00000441522 278 ntBASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 HMGN2P18-201ENST00000450680 270 ntBASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 AC005741.1-201ENST00000511094 432 ntBASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 RNU4-49P-201ENST00000516080 140 ntBASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 RNU6-1088P-201ENST00000516850 104 ntBASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 AC008749.1-201ENST00000597650 306 ntBASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 BNIP3P10-201ENST00000605360 577 ntBASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 AC025754.2-201ENST00000606491 432 ntBASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 AC019193.3-201ENST00000609144 554 ntBASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 AC084782.3-201ENST00000612282 578 ntBASIC1.65□□□□□ -2.15
C9orf40Q8IXQ3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms