Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 RNU6-95P-201ENST00000384697 107 ntBASIC1.58□□□□□ -2.16
SKA3Q8IX90 MIR9-3-201ENST00000385084 90 ntBASIC1.58□□□□□ -2.16
SKA3Q8IX90 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SKA3Q8IX90 RNU2-41P-201ENST00000410991 178 ntBASIC1.58□□□□□ -2.16
SKA3Q8IX90 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.58□□□□□ -2.16
SKA3Q8IX90 AL513185.2-201ENST00000425543 193 ntBASIC1.58□□□□□ -2.16
SKA3Q8IX90 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.58□□□□□ -2.16
SKA3Q8IX90 AC010095.1-201ENST00000443543 144 ntBASIC1.58□□□□□ -2.16
SKA3Q8IX90 RPL23AP6-201ENST00000446637 472 ntBASIC1.58□□□□□ -2.16
SKA3Q8IX90 snoU13.26-201ENST00000459452 105 ntBASIC1.58□□□□□ -2.16
SKA3Q8IX90 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.58□□□□□ -2.16
SKA3Q8IX90 ATP5EP1-201ENST00000510257 156 ntBASIC1.58□□□□□ -2.16
SKA3Q8IX90 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.58□□□□□ -2.16
SKA3Q8IX90 RNU6-718P-201ENST00000516166 105 ntBASIC1.58□□□□□ -2.16
SKA3Q8IX90 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.58□□□□□ -2.16
SKA3Q8IX90 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.58□□□□□ -2.16
SKA3Q8IX90 MIR4419B-201ENST00000577260 68 ntBASIC1.58□□□□□ -2.16
SKA3Q8IX90 AC023043.2-201ENST00000589678 1026 ntBASIC1.58□□□□□ -2.16
SKA3Q8IX90 AC243960.4-201ENST00000600532 288 ntBASIC1.58□□□□□ -2.16
SKA3Q8IX90 AC005034.5-201ENST00000604219 466 ntBASIC1.58□□□□□ -2.16
SKA3Q8IX90 AC025754.2-201ENST00000606491 432 ntBASIC1.58□□□□□ -2.16
SKA3Q8IX90 AL138726.1-201ENST00000614873 333 ntBASIC1.58□□□□□ -2.16
SKA3Q8IX90 AC100810.6-201ENST00000638068 285 ntBASIC1.58□□□□□ -2.16
SKA3Q8IX90 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.58□□□□□ -2.16
SKA3Q8IX90 RNU1-58P-201ENST00000362413 163 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 RNU6-562P-201ENST00000362731 107 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 RNU6-1286P-201ENST00000383871 107 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 RNU6-1093P-201ENST00000391194 107 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 MIR1289-2-201ENST00000408360 111 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 RNA5SP118-201ENST00000410385 109 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SKA3Q8IX90 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.57□□□□□ -2.16
SKA3Q8IX90 FTH1P25-201ENST00000447665 469 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 HMGN2P18-201ENST00000450680 270 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 AC092989.1-201ENST00000481235 277 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 RPL23AP63-201ENST00000498752 471 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 AC005741.1-201ENST00000511094 432 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 RNU5F-4P-201ENST00000516581 114 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 RNU6-1098P-201ENST00000516772 96 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 RNU6-273P-201ENST00000516937 96 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 RNU6-1314P-201ENST00000517139 104 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 MRPS36P4-201ENST00000534436 298 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.57□□□□□ -2.16
SKA3Q8IX90 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.57□□□□□ -2.16
SKA3Q8IX90 CPDP1-201ENST00000579660 283 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 MIR3942-201ENST00000585264 109 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 AC005858.4-201ENST00000623191 700 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 AC073869.6-201ENST00000640656 341 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.57□□□□□ -2.16
SKA3Q8IX90 AC008555.8-201ENST00000623602 2168 ntBASIC1.57□□□□□ -2.16
SKA3Q8IX90 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SKA3Q8IX90 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SKA3Q8IX90 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SKA3Q8IX90 RNU5B-2P-201ENST00000363036 113 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 Y_RNA.135-201ENST00000363439 95 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 Y_RNA.151-201ENST00000363566 112 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 Y_RNA.157-201ENST00000363638 102 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 Y_RNA.212-201ENST00000364177 102 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 Y_RNA.332-201ENST00000365271 113 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
SKA3Q8IX90 RNU11-3P-201ENST00000391111 133 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 AL356432.1-201ENST00000405809 419 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 RNA5SP494-201ENST00000410653 129 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 RNU6-1148P-201ENST00000410992 104 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.56□□□□□ -2.16
SKA3Q8IX90 AC009161.1-201ENST00000417306 376 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 ZNF885P-201ENST00000420174 1098 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 Z82205.1-201ENST00000428456 297 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.56□□□□□ -2.16
SKA3Q8IX90 MTND2P29-201ENST00000438595 412 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SKA3Q8IX90 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.56□□□□□ -2.16
SKA3Q8IX90 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.56□□□□□ -2.16
SKA3Q8IX90 AC130509.1-201ENST00000464158 433 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 AF186996.7-201ENST00000492781 209 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 YWHAEP4-201ENST00000505390 198 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.56□□□□□ -2.16
SKA3Q8IX90 AP005639.2-201ENST00000527592 928 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.56□□□□□ -2.16
SKA3Q8IX90 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.56□□□□□ -2.16
SKA3Q8IX90 MIR6845-201ENST00000613182 61 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 AC245060.5-201ENST00000610778 3293 ntBASIC1.56□□□□□ -2.16
SKA3Q8IX90 AC027514.1-201ENST00000588561 1603 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 RNU6-23P-201ENST00000363283 107 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 RNU4-42P-201ENST00000364738 142 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 SNORA18.2-201ENST00000383865 132 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 SNORA32.2-201ENST00000384049 122 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 MIR517A-201ENST00000385001 87 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 MIR1277-201ENST00000408536 78 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 AL645568.3-201ENST00000433683 316 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 AL121890.1-201ENST00000435457 205 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 HSPE1P21-201ENST00000438283 308 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 SNRPEP8-201ENST00000442866 260 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.55□□□□□ -2.16
SKA3Q8IX90 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 PCMTD1P1-201ENST00000455560 355 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 MTND1P11-201ENST00000456661 876 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 244 ms