Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.14□□□□□ -2.07
CDK3Q00526 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.14□□□□□ -2.07
CDK3Q00526 AC233702.2-202ENST00000562547 291 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 AC026271.5-201ENST00000577873 130 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 MIR5696-201ENST00000578474 85 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 AL158827.2-201ENST00000602494 330 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 SNRPGP17-201ENST00000603780 214 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 AC009229.3-201ENST00000608056 282 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.14□□□□□ -2.07
CDK3Q00526 AL691447.3-201ENST00000635020 330 ntBASIC2.14□□□□□ -2.07
CDK3Q00526 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
CDK3Q00526 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CDK3Q00526 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.13□□□□□ -2.07
CDK3Q00526 Y_RNA.2-201ENST00000362330 96 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 Y_RNA.48-201ENST00000362710 103 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 RNU6-234P-201ENST00000365229 104 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 RNY3P14-201ENST00000384309 102 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 SNORA80E-201ENST00000384744 137 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 RNU4-14P-201ENST00000410858 122 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 RNA5SP270-201ENST00000411361 118 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.13□□□□□ -2.07
CDK3Q00526 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 AL137159.1-201ENST00000452808 512 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 PRELID3BP1-201ENST00000457142 540 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 Y_RNA.635-201ENST00000459041 101 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 HMGB3P3-201ENST00000510526 400 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 RNU6-991P-201ENST00000516168 107 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 AC105029.1-201ENST00000520250 669 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 IGKV3-31-201ENST00000523109 329 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.13□□□□□ -2.07
CDK3Q00526 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.13□□□□□ -2.07
CDK3Q00526 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.13□□□□□ -2.07
CDK3Q00526 AC010928.2-201ENST00000588017 287 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 AL031274.2-201ENST00000599419 203 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 AC016727.1-205ENST00000605437 569 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 AL137847.3-201ENST00000611521 109 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.13□□□□□ -2.07
CDK3Q00526 AC245884.12-201ENST00000615364 59 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 AC137590.2-201ENST00000619709 240 ntBASIC2.13□□□□□ -2.07
CDK3Q00526 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CDK3Q00526 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDK3Q00526 SNORA18.2-201ENST00000383865 132 ntBASIC2.12□□□□□ -2.07
CDK3Q00526 MIR32-201ENST00000384965 70 ntBASIC2.12□□□□□ -2.07
CDK3Q00526 MIR524-201ENST00000385242 87 ntBASIC2.12□□□□□ -2.07
CDK3Q00526 AL023284.1-201ENST00000403956 276 ntBASIC2.12□□□□□ -2.07
CDK3Q00526 RPS26P42-201ENST00000413485 326 ntBASIC2.12□□□□□ -2.07
CDK3Q00526 AC243428.1-201ENST00000421099 264 ntBASIC2.12□□□□□ -2.07
CDK3Q00526 AC027124.2-201ENST00000428249 105 ntBASIC2.12□□□□□ -2.07
CDK3Q00526 MTND5P20-201ENST00000448677 143 ntBASIC2.12□□□□□ -2.07
CDK3Q00526 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.12□□□□□ -2.07
CDK3Q00526 RPL7P42-201ENST00000481005 679 ntBASIC2.12□□□□□ -2.07
CDK3Q00526 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.12□□□□□ -2.07
CDK3Q00526 PRELID2P1-201ENST00000552837 301 ntBASIC2.12□□□□□ -2.07
CDK3Q00526 7SK.7-201ENST00000603504 247 ntBASIC2.12□□□□□ -2.07
CDK3Q00526 AC016727.2-201ENST00000603988 621 ntBASIC2.12□□□□□ -2.07
CDK3Q00526 PISRT1.1-201ENST00000616930 107 ntBASIC2.12□□□□□ -2.07
CDK3Q00526 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CDK3Q00526 MIR219B-201ENST00000637023 88 ntBASIC2.12□□□□□ -2.07
CDK3Q00526 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CDK3Q00526 ZNF299P-201ENST00000406845 1804 ntBASIC2.12□□□□□ -2.07
CDK3Q00526 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CDK3Q00526 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
CDK3Q00526 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.11□□□□□ -2.07
CDK3Q00526 SNORA67.3-201ENST00000384366 140 ntBASIC2.11□□□□□ -2.07
CDK3Q00526 MIR487A-201ENST00000385009 80 ntBASIC2.11□□□□□ -2.07
CDK3Q00526 MIR549A-201ENST00000385268 96 ntBASIC2.11□□□□□ -2.07
CDK3Q00526 AL121890.1-201ENST00000435457 205 ntBASIC2.11□□□□□ -2.07
CDK3Q00526 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.11□□□□□ -2.07
CDK3Q00526 snoU13.30-201ENST00000458951 104 ntBASIC2.11□□□□□ -2.07
CDK3Q00526 AC093259.1-201ENST00000509755 300 ntBASIC2.11□□□□□ -2.07
CDK3Q00526 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.11□□□□□ -2.07
CDK3Q00526 RNU6-875P-201ENST00000516488 106 ntBASIC2.11□□□□□ -2.07
CDK3Q00526 RNU5F-4P-201ENST00000516581 114 ntBASIC2.11□□□□□ -2.07
CDK3Q00526 RNU7-193P-201ENST00000516723 65 ntBASIC2.11□□□□□ -2.07
CDK3Q00526 RNU6-1098P-201ENST00000516772 96 ntBASIC2.11□□□□□ -2.07
CDK3Q00526 RNA5SP137-201ENST00000516833 135 ntBASIC2.11□□□□□ -2.07
CDK3Q00526 RNA5SP490-201ENST00000517141 136 ntBASIC2.11□□□□□ -2.07
CDK3Q00526 CBX3P8-201ENST00000532412 525 ntBASIC2.11□□□□□ -2.07
CDK3Q00526 AC025754.2-201ENST00000606491 432 ntBASIC2.11□□□□□ -2.07
CDK3Q00526 AC092794.2-201ENST00000620933 563 ntBASIC2.11□□□□□ -2.07
CDK3Q00526 AL359757.2-201ENST00000624309 274 ntBASIC2.11□□□□□ -2.07
CDK3Q00526 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.11□□□□□ -2.07
CDK3Q00526 KPNA2P1-201ENST00000458289 1591 ntBASIC2.1□□□□□ -2.07
CDK3Q00526 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDK3Q00526 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDK3Q00526 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDK3Q00526 SNORD115-3-201ENST00000363100 82 ntBASIC2.1□□□□□ -2.07
CDK3Q00526 SNORA75.4-201ENST00000391278 119 ntBASIC2.1□□□□□ -2.07
CDK3Q00526 AL357139.1-201ENST00000407792 426 ntBASIC2.1□□□□□ -2.07
CDK3Q00526 MIR1262-201ENST00000408276 93 ntBASIC2.1□□□□□ -2.07
CDK3Q00526 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.1□□□□□ -2.07
CDK3Q00526 RNU6-370P-201ENST00000411008 104 ntBASIC2.1□□□□□ -2.07
CDK3Q00526 MTND4LP11-201ENST00000422184 280 ntBASIC2.1□□□□□ -2.07
CDK3Q00526 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.1□□□□□ -2.07
CDK3Q00526 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.1□□□□□ -2.07
CDK3Q00526 AC092473.1-201ENST00000441098 221 ntBASIC2.1□□□□□ -2.07
CDK3Q00526 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.1□□□□□ -2.07
CDK3Q00526 RPL30P10-201ENST00000488148 337 ntBASIC2.1□□□□□ -2.07
CDK3Q00526 YWHAEP4-201ENST00000505390 198 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms