Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC022441.3-201ENST00000605737 136 ntBASIC3.01□□□□□ -1.93
CD40P25942 AC096577.2-201ENST00000611455 153 ntBASIC3.01□□□□□ -1.93
CD40P25942 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CD40P25942 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CD40P25942 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3□□□□□ -1.93
CD40P25942 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CD40P25942 Y_RNA.54-201ENST00000362766 105 ntBASIC3□□□□□ -1.93
CD40P25942 RNA5SP267-201ENST00000364893 126 ntBASIC3□□□□□ -1.93
CD40P25942 RNU6-1264P-201ENST00000383891 107 ntBASIC3□□□□□ -1.93
CD40P25942 Y_RNA.416-201ENST00000384014 113 ntBASIC3□□□□□ -1.93
CD40P25942 RNU6-1310P-201ENST00000384153 107 ntBASIC3□□□□□ -1.93
CD40P25942 Y_RNA.569-201ENST00000384749 103 ntBASIC3□□□□□ -1.93
CD40P25942 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3□□□□□ -1.93
CD40P25942 AL603910.2-201ENST00000407268 136 ntBASIC3□□□□□ -1.93
CD40P25942 RPL23AP36-201ENST00000413895 458 ntBASIC3□□□□□ -1.93
CD40P25942 AC005042.3-201ENST00000453230 174 ntBASIC3□□□□□ -1.93
CD40P25942 AC008155.2-201ENST00000464337 397 ntBASIC3□□□□□ -1.93
CD40P25942 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3□□□□□ -1.93
CD40P25942 SERF1AP1-201ENST00000514575 187 ntBASIC3□□□□□ -1.93
CD40P25942 RNU6-966P-201ENST00000516479 104 ntBASIC3□□□□□ -1.93
CD40P25942 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3□□□□□ -1.93
CD40P25942 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3□□□□□ -1.93
CD40P25942 AC008749.1-201ENST00000597650 306 ntBASIC3□□□□□ -1.93
CD40P25942 MIR5739-201ENST00000619803 80 ntBASIC3□□□□□ -1.93
CD40P25942 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3□□□□□ -1.93
CD40P25942 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3□□□□□ -1.93
CD40P25942 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CD40P25942 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3□□□□□ -1.93
CD40P25942 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.99□□□□□ -1.93
CD40P25942 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CD40P25942 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.99□□□□□ -1.93
CD40P25942 Y_RNA.352-201ENST00000365439 102 ntBASIC2.99□□□□□ -1.93
CD40P25942 SNORA67.2-201ENST00000384300 149 ntBASIC2.99□□□□□ -1.93
CD40P25942 Y_RNA.478-201ENST00000384358 107 ntBASIC2.99□□□□□ -1.93
CD40P25942 RN7SKP111-201ENST00000410349 271 ntBASIC2.99□□□□□ -1.93
CD40P25942 RPL19P1-201ENST00000411635 428 ntBASIC2.99□□□□□ -1.93
CD40P25942 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.99□□□□□ -1.93
CD40P25942 POLR2KP2-201ENST00000438155 177 ntBASIC2.99□□□□□ -1.93
CD40P25942 RNU7-14P-201ENST00000459331 62 ntBASIC2.99□□□□□ -1.93
CD40P25942 AC080013.2-201ENST00000460866 323 ntBASIC2.99□□□□□ -1.93
CD40P25942 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.99□□□□□ -1.93
CD40P25942 RNU6-965P-201ENST00000516721 96 ntBASIC2.99□□□□□ -1.93
CD40P25942 IGKV2-26-201ENST00000518305 343 ntBASIC2.99□□□□□ -1.93
CD40P25942 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.99□□□□□ -1.93
CD40P25942 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.99□□□□□ -1.93
CD40P25942 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.99□□□□□ -1.93
CD40P25942 AC092628.2-201ENST00000622492 339 ntBASIC2.99□□□□□ -1.93
CD40P25942 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CD40P25942 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC2.99□□□□□ -1.93
CD40P25942 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CD40P25942 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CD40P25942 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CD40P25942 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CD40P25942 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CD40P25942 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.98□□□□□ -1.93
CD40P25942 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.98□□□□□ -1.93
CD40P25942 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.98□□□□□ -1.93
CD40P25942 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CD40P25942 RNA5SP197-201ENST00000363357 119 ntBASIC2.98□□□□□ -1.93
CD40P25942 RNU6-1305P-201ENST00000364353 104 ntBASIC2.98□□□□□ -1.93
CD40P25942 Y_RNA.257-201ENST00000364596 102 ntBASIC2.98□□□□□ -1.93
CD40P25942 RNU6-283P-201ENST00000364788 107 ntBASIC2.98□□□□□ -1.93
CD40P25942 RNU6-234P-201ENST00000365229 104 ntBASIC2.98□□□□□ -1.93
CD40P25942 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
CD40P25942 Y_RNA.446-201ENST00000384178 104 ntBASIC2.98□□□□□ -1.93
CD40P25942 Y_RNA.552-201ENST00000384665 112 ntBASIC2.98□□□□□ -1.93
CD40P25942 RHEBP3-201ENST00000411920 351 ntBASIC2.98□□□□□ -1.93
CD40P25942 AC017079.2-201ENST00000416102 485 ntBASIC2.98□□□□□ -1.93
CD40P25942 AL513477.1-202ENST00000417061 214 ntBASIC2.98□□□□□ -1.93
CD40P25942 MRPS10P1-201ENST00000448483 130 ntBASIC2.98□□□□□ -1.93
CD40P25942 RNU7-170P-201ENST00000459303 61 ntBASIC2.98□□□□□ -1.93
CD40P25942 RPS29P26-201ENST00000477483 171 ntBASIC2.98□□□□□ -1.93
CD40P25942 FCF1P8-201ENST00000510322 597 ntBASIC2.98□□□□□ -1.93
CD40P25942 RNU6-155P-201ENST00000516347 100 ntBASIC2.98□□□□□ -1.93
CD40P25942 RNU2-31P-201ENST00000516954 155 ntBASIC2.98□□□□□ -1.93
CD40P25942 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.98□□□□□ -1.93
CD40P25942 AC037487.3-201ENST00000606668 112 ntBASIC2.98□□□□□ -1.93
CD40P25942 AC008873.1-201ENST00000625051 138 ntBASIC2.98□□□□□ -1.93
CD40P25942 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.98□□□□□ -1.93
CD40P25942 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.98□□□□□ -1.93
CD40P25942 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CD40P25942 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.98□□□□□ -1.93
CD40P25942 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.98□□□□□ -1.93
CD40P25942 AC073346.2-201ENST00000624724 2058 ntBASIC2.97□□□□□ -1.93
CD40P25942 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
CD40P25942 AC068647.1-201ENST00000489539 2265 ntBASIC2.97□□□□□ -1.93
CD40P25942 MIR423-201ENST00000362201 94 ntBASIC2.97□□□□□ -1.93
CD40P25942 Y_RNA.20-201ENST00000362479 113 ntBASIC2.97□□□□□ -1.93
CD40P25942 RNU6-545P-201ENST00000362681 104 ntBASIC2.97□□□□□ -1.93
CD40P25942 RNU6-1266P-201ENST00000362794 105 ntBASIC2.97□□□□□ -1.93
CD40P25942 RNU6-461P-201ENST00000364195 107 ntBASIC2.97□□□□□ -1.93
CD40P25942 RNU6-326P-201ENST00000365480 107 ntBASIC2.97□□□□□ -1.93
CD40P25942 Y_RNA.383-201ENST00000383855 97 ntBASIC2.97□□□□□ -1.93
CD40P25942 RNU6-907P-201ENST00000390924 102 ntBASIC2.97□□□□□ -1.93
CD40P25942 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CD40P25942 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.97□□□□□ -1.93
CD40P25942 AL161788.1-201ENST00000441805 169 ntBASIC2.97□□□□□ -1.93
CD40P25942 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.97□□□□□ -1.93
CD40P25942 RPS29P31-201ENST00000446147 164 ntBASIC2.97□□□□□ -1.93
CD40P25942 AC006483.1-201ENST00000487308 313 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms