Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 Y_RNA.455-201ENST00000384230 98 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 Y_RNA.504-201ENST00000384481 104 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 Y_RNA.526-201ENST00000384572 110 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 AC113618.1-201ENST00000416747 285 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 AC138623.1-201ENST00000418060 216 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.6□□□□□ -1.83
RAPGEF3O95398 AC104389.3-201ENST00000445629 235 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 AL353752.1-201ENST00000454946 260 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 AC091179.1-201ENST00000461606 579 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 SNRPGP7-201ENST00000469016 106 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 RPL30P1-201ENST00000488676 339 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 AC092185.1-201ENST00000491371 97 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 AC093852.1-201ENST00000503587 266 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 RNU6-764P-201ENST00000516396 105 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 HSPE1P18-201ENST00000517602 280 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 HSBP1P1-201ENST00000555205 166 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 MIR4781-201ENST00000585250 76 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 AL159153.1-201ENST00000619688 317 ntBASIC3.6□□□□□ -1.83
RAPGEF3O95398 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.6□□□□□ -1.83
RAPGEF3O95398 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.59□□□□□ -1.83
RAPGEF3O95398 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RAPGEF3O95398 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RAPGEF3O95398 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
RAPGEF3O95398 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
RAPGEF3O95398 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.59□□□□□ -1.83
RAPGEF3O95398 Y_RNA.424-201ENST00000384063 103 ntBASIC3.59□□□□□ -1.83
RAPGEF3O95398 U8.13-201ENST00000390842 128 ntBASIC3.59□□□□□ -1.83
RAPGEF3O95398 RNA5SP210-201ENST00000391034 120 ntBASIC3.59□□□□□ -1.83
RAPGEF3O95398 RPL21P3-201ENST00000395517 478 ntBASIC3.59□□□□□ -1.83
RAPGEF3O95398 MTCO3P19-201ENST00000415864 321 ntBASIC3.59□□□□□ -1.83
RAPGEF3O95398 CYCSP49-201ENST00000420810 319 ntBASIC3.59□□□□□ -1.83
RAPGEF3O95398 AL358075.3-201ENST00000426289 226 ntBASIC3.59□□□□□ -1.83
RAPGEF3O95398 AC009296.1-201ENST00000443146 155 ntBASIC3.59□□□□□ -1.83
RAPGEF3O95398 AC146507.2-201ENST00000460608 476 ntBASIC3.59□□□□□ -1.83
RAPGEF3O95398 RPS27P29-201ENST00000463110 252 ntBASIC3.59□□□□□ -1.83
RAPGEF3O95398 AC022616.4-201ENST00000522985 181 ntBASIC3.59□□□□□ -1.83
RAPGEF3O95398 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.59□□□□□ -1.83
RAPGEF3O95398 AC104695.3-201ENST00000604052 296 ntBASIC3.59□□□□□ -1.83
RAPGEF3O95398 AL359198.2-201ENST00000611836 194 ntBASIC3.59□□□□□ -1.83
RAPGEF3O95398 U2.1-201ENST00000618978 145 ntBASIC3.59□□□□□ -1.83
RAPGEF3O95398 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.59□□□□□ -1.83
RAPGEF3O95398 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.58□□□□□ -1.84
RAPGEF3O95398 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.58□□□□□ -1.84
RAPGEF3O95398 RNU1-17P-201ENST00000363022 152 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 Y_RNA.508-201ENST00000384502 114 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 Y_RNA.645-201ENST00000391229 102 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 Y_RNA.592-201ENST00000410274 109 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 RNU6-101P-201ENST00000410323 104 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 MTCO3P29-201ENST00000432119 779 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.58□□□□□ -1.84
RAPGEF3O95398 snoU13.14-201ENST00000459372 104 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.58□□□□□ -1.84
RAPGEF3O95398 AF186996.7-201ENST00000492781 209 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 AC021146.2-201ENST00000504736 556 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 RAC1P5-201ENST00000512182 576 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.58□□□□□ -1.84
RAPGEF3O95398 RNA5SP445-201ENST00000515889 115 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 RNU6-567P-201ENST00000516746 107 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 MIR2355-201ENST00000517199 87 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 AC245166.1-201ENST00000521012 253 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 MIR5188-201ENST00000583467 113 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 MIR3136-201ENST00000583498 78 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 AC010928.2-201ENST00000588017 287 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 Z98751.3-201ENST00000604447 521 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 AL078596.1-201ENST00000624856 447 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 AC110079.1-202ENST00000635213 138 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 AC091812.1-201ENST00000432235 1948 ntBASIC3.58□□□□□ -1.84
RAPGEF3O95398 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RAPGEF3O95398 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RAPGEF3O95398 SNORD14.1-201ENST00000365609 90 ntBASIC3.57□□□□□ -1.84
RAPGEF3O95398 Y_RNA.380-201ENST00000365663 111 ntBASIC3.57□□□□□ -1.84
RAPGEF3O95398 RNU6-17P-201ENST00000384245 107 ntBASIC3.57□□□□□ -1.84
RAPGEF3O95398 RNU6-18P-201ENST00000384527 107 ntBASIC3.57□□□□□ -1.84
RAPGEF3O95398 MIR153-2-201ENST00000385225 87 ntBASIC3.57□□□□□ -1.84
RAPGEF3O95398 AL023284.1-201ENST00000403956 276 ntBASIC3.57□□□□□ -1.84
RAPGEF3O95398 Z82188.1-201ENST00000436709 154 ntBASIC3.57□□□□□ -1.84
RAPGEF3O95398 MTND5P16-201ENST00000460269 1703 ntBASIC3.57□□□□□ -1.84
RAPGEF3O95398 AP001324.2-201ENST00000461163 319 ntBASIC3.57□□□□□ -1.84
RAPGEF3O95398 AC087477.1-201ENST00000465747 340 ntBASIC3.57□□□□□ -1.84
RAPGEF3O95398 AC108729.3-201ENST00000513484 108 ntBASIC3.57□□□□□ -1.84
RAPGEF3O95398 AC006600.1-201ENST00000572529 153 ntBASIC3.57□□□□□ -1.84
RAPGEF3O95398 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.57□□□□□ -1.84
RAPGEF3O95398 AL450472.1-202ENST00000637286 180 ntBASIC3.57□□□□□ -1.84
RAPGEF3O95398 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.57□□□□□ -1.84
RAPGEF3O95398 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.57□□□□□ -1.84
RAPGEF3O95398 AL109809.4-201ENST00000603520 2185 ntBASIC3.56□□□□□ -1.84
RAPGEF3O95398 Y_RNA.389-201ENST00000383924 113 ntBASIC3.56□□□□□ -1.84
RAPGEF3O95398 Y_RNA.527-201ENST00000384573 102 ntBASIC3.56□□□□□ -1.84
RAPGEF3O95398 MIR628-201ENST00000385229 95 ntBASIC3.56□□□□□ -1.84
RAPGEF3O95398 AL133475.1-201ENST00000404414 305 ntBASIC3.56□□□□□ -1.84
RAPGEF3O95398 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.56□□□□□ -1.84
RAPGEF3O95398 AC009414.1-201ENST00000427200 443 ntBASIC3.56□□□□□ -1.84
RAPGEF3O95398 CHEK2P4-201ENST00000450340 246 ntBASIC3.56□□□□□ -1.84
RAPGEF3O95398 RNU6-295P-201ENST00000516901 104 ntBASIC3.56□□□□□ -1.84
RAPGEF3O95398 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.56□□□□□ -1.84
RAPGEF3O95398 AC079598.5-201ENST00000547460 117 ntBASIC3.56□□□□□ -1.84
RAPGEF3O95398 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.56□□□□□ -1.84
RAPGEF3O95398 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RAPGEF3O95398 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAPGEF3O95398 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms