Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SSNA1O43805 MTND5P17-201ENST00000418405 1603 ntBASIC0.47□□□□□ -2.33
SSNA1O43805 RNU4-76P-201ENST00000364509 141 ntBASIC0.47□□□□□ -2.33
SSNA1O43805 RNU6-169P-201ENST00000365336 107 ntBASIC0.47□□□□□ -2.33
SSNA1O43805 Y_RNA.367-201ENST00000365544 101 ntBASIC0.47□□□□□ -2.33
SSNA1O43805 RNU6-110P-201ENST00000384508 104 ntBASIC0.47□□□□□ -2.33
SSNA1O43805 MIR1253-201ENST00000408273 105 ntBASIC0.47□□□□□ -2.33
SSNA1O43805 AC004941.2-201ENST00000427009 228 ntBASIC0.47□□□□□ -2.33
SSNA1O43805 AL035398.1-201ENST00000430869 322 ntBASIC0.47□□□□□ -2.33
SSNA1O43805 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.47□□□□□ -2.33
SSNA1O43805 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.47□□□□□ -2.33
SSNA1O43805 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.47□□□□□ -2.33
SSNA1O43805 RNU4-54P-201ENST00000516428 129 ntBASIC0.47□□□□□ -2.33
SSNA1O43805 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.47□□□□□ -2.33
SSNA1O43805 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.47□□□□□ -2.33
SSNA1O43805 APOOP3-201ENST00000536787 586 ntBASIC0.47□□□□□ -2.33
SSNA1O43805 AL513423.1-201ENST00000621695 132 ntBASIC0.47□□□□□ -2.33
SSNA1O43805 MIR6852-201ENST00000621699 66 ntBASIC0.47□□□□□ -2.33
SSNA1O43805 AC009878.1-201ENST00000621819 340 ntBASIC0.47□□□□□ -2.33
SSNA1O43805 AL049777.1-201ENST00000622740 518 ntBASIC0.47□□□□□ -2.33
SSNA1O43805 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.47□□□□□ -2.33
SSNA1O43805 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.47□□□□□ -2.33
SSNA1O43805 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
SSNA1O43805 AL355796.1-201ENST00000406706 323 ntBASIC0.46□□□□□ -2.34
SSNA1O43805 MTCO2P23-201ENST00000425216 680 ntBASIC0.46□□□□□ -2.34
SSNA1O43805 AC005002.2-201ENST00000438228 269 ntBASIC0.46□□□□□ -2.34
SSNA1O43805 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.46□□□□□ -2.34
SSNA1O43805 PCMTD1P2-201ENST00000565017 355 ntBASIC0.46□□□□□ -2.34
SSNA1O43805 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.46□□□□□ -2.34
SSNA1O43805 MIR4778-201ENST00000577635 80 ntBASIC0.46□□□□□ -2.34
SSNA1O43805 MIR5006-201ENST00000583027 110 ntBASIC0.46□□□□□ -2.34
SSNA1O43805 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.46□□□□□ -2.34
SSNA1O43805 AC146944.4-201ENST00000602697 718 ntBASIC0.46□□□□□ -2.34
SSNA1O43805 AC009229.3-201ENST00000608056 282 ntBASIC0.46□□□□□ -2.34
SSNA1O43805 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.46□□□□□ -2.34
SSNA1O43805 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
SSNA1O43805 MIR520E-201ENST00000384867 87 ntBASIC0.45□□□□□ -2.34
SSNA1O43805 AC016909.1-201ENST00000415916 166 ntBASIC0.45□□□□□ -2.34
SSNA1O43805 AC104850.1-201ENST00000435940 476 ntBASIC0.45□□□□□ -2.34
SSNA1O43805 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC0.45□□□□□ -2.34
SSNA1O43805 AC004386.2-201ENST00000441858 148 ntBASIC0.45□□□□□ -2.34
SSNA1O43805 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.45□□□□□ -2.34
SSNA1O43805 AC079382.1-201ENST00000493346 557 ntBASIC0.45□□□□□ -2.34
SSNA1O43805 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.45□□□□□ -2.34
SSNA1O43805 RNA5SP121-201ENST00000516537 101 ntBASIC0.45□□□□□ -2.34
SSNA1O43805 SNORA25.17-201ENST00000517184 124 ntBASIC0.45□□□□□ -2.34
SSNA1O43805 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.45□□□□□ -2.34
SSNA1O43805 AL391840.1-201ENST00000571144 367 ntBASIC0.45□□□□□ -2.34
SSNA1O43805 MIR4999-201ENST00000585029 91 ntBASIC0.45□□□□□ -2.34
SSNA1O43805 BNIP3P10-201ENST00000605360 577 ntBASIC0.45□□□□□ -2.34
SSNA1O43805 AC002044.1-201ENST00000606707 158 ntBASIC0.45□□□□□ -2.34
SSNA1O43805 AP001596.2-201ENST00000608410 312 ntBASIC0.45□□□□□ -2.34
SSNA1O43805 AC018645.2-201ENST00000609151 472 ntBASIC0.45□□□□□ -2.34
SSNA1O43805 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.45□□□□□ -2.34
SSNA1O43805 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
SSNA1O43805 AC022418.1-201ENST00000624118 445 ntBASIC0.45□□□□□ -2.34
SSNA1O43805 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
SSNA1O43805 RNU6-1335P-201ENST00000365426 107 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 MIR660-201ENST00000385235 97 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 RNU6-440P-201ENST00000390882 105 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 RNU6-57P-201ENST00000411348 103 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 AP000275.1-201ENST00000411943 390 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 AC245047.3-201ENST00000429428 127 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.44□□□□□ -2.34
SSNA1O43805 RPEP5-201ENST00000441137 268 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 NFU1P2-201ENST00000448700 469 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 RNU7-21P-201ENST00000459430 62 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.44□□□□□ -2.34
SSNA1O43805 AC098799.1-201ENST00000504752 800 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 AC025465.4-201ENST00000513422 638 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 RNU1-142P-201ENST00000516682 145 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 AC090572.1-201ENST00000519251 160 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.44□□□□□ -2.34
SSNA1O43805 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.44□□□□□ -2.34
SSNA1O43805 MIR4509-3-201ENST00000578671 94 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 MIR4509-2-201ENST00000583920 94 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 MIR4781-201ENST00000585250 76 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 AC027807.2-201ENST00000616099 408 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 MIR4509-1-201ENST00000618224 94 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 AL359697.1-201ENST00000624879 587 ntBASIC0.44□□□□□ -2.34
SSNA1O43805 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SSNA1O43805 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.43□□□□□ -2.34
SSNA1O43805 AL391987.6-201ENST00000305671 199 ntBASIC0.43□□□□□ -2.34
SSNA1O43805 Y_RNA.480-201ENST00000384364 102 ntBASIC0.43□□□□□ -2.34
SSNA1O43805 MIR653-201ENST00000385279 96 ntBASIC0.43□□□□□ -2.34
SSNA1O43805 SNORA75.2-201ENST00000391138 150 ntBASIC0.43□□□□□ -2.34
SSNA1O43805 SNORA75.3-201ENST00000391231 150 ntBASIC0.43□□□□□ -2.34
SSNA1O43805 AC004866.1-201ENST00000411748 78 ntBASIC0.43□□□□□ -2.34
SSNA1O43805 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.43□□□□□ -2.34
SSNA1O43805 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.43□□□□□ -2.34
SSNA1O43805 MTATP6P14-201ENST00000455189 673 ntBASIC0.43□□□□□ -2.34
SSNA1O43805 AC098869.1-201ENST00000481627 292 ntBASIC0.43□□□□□ -2.34
SSNA1O43805 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.43□□□□□ -2.34
SSNA1O43805 AP000873.5-201ENST00000533906 236 ntBASIC0.43□□□□□ -2.34
SSNA1O43805 AC112191.3-201ENST00000604371 277 ntBASIC0.43□□□□□ -2.34
SSNA1O43805 AC091304.9-201ENST00000612091 226 ntBASIC0.43□□□□□ -2.34
SSNA1O43805 TCL6_2.1-201ENST00000615162 119 ntBASIC0.43□□□□□ -2.34
SSNA1O43805 AC073349.3-201ENST00000617616 186 ntBASIC0.43□□□□□ -2.34
SSNA1O43805 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.43□□□□□ -2.34
SSNA1O43805 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms