Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU5B-2P-201ENST00000363036 113 ntBASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 Y_RNA.123-201ENST00000363338 102 ntBASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-611P-201ENST00000384276 104 ntBASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 MIR9-3-201ENST00000385084 90 ntBASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 RNA5SP213-201ENST00000391031 106 ntBASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 AL356776.1-201ENST00000406574 447 ntBASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 AC012306.1-201ENST00000423267 114 ntBASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 AC021146.2-201ENST00000504736 556 ntBASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 AC018710.1-201ENST00000506509 158 ntBASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 RNA5SP454-201ENST00000517231 127 ntBASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 CYP4A27P-201ENST00000567218 190 ntBASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 AL133216.2-202ENST00000634512 349 ntBASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.89□□□□□ -2.11
NEDD8-MDP1E9PL57 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 SNORD50.1-201ENST00000362987 71 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 Y_RNA.140-201ENST00000363474 103 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 MIR521-1-201ENST00000384902 87 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 MTCO3P46-201ENST00000425787 232 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 RBMX2P4-201ENST00000441256 376 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 PCMTD1P1-201ENST00000455560 355 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 RPS29P11-201ENST00000496507 171 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-991P-201ENST00000516168 107 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU7-193P-201ENST00000516723 65 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 RNA5SP137-201ENST00000516833 135 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 AP005639.2-201ENST00000527592 928 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 MIR4742-201ENST00000581069 85 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 FGF7P1-201ENST00000582820 288 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 MIR3935-201ENST00000583472 104 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 AC008749.1-201ENST00000597650 306 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 AC009994.1-201ENST00000606889 253 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 MIR8081-201ENST00000611533 95 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 AL161423.1-201ENST00000613700 262 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.88□□□□□ -2.11
NEDD8-MDP1E9PL57 CASC19-280ENST00000642102 1351 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-1286P-201ENST00000383871 107 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-1013P-201ENST00000384180 107 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 MIR517A-201ENST00000385001 87 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-510P-201ENST00000391239 108 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 FGF7P8-201ENST00000402994 292 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 AL590556.1-201ENST00000423231 483 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 MTND1P17-201ENST00000448961 204 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 MIR449C-201ENST00000516047 92 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 RNA5SP458-201ENST00000516188 119 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 SNORA25.15-201ENST00000516487 89 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-273P-201ENST00000516937 96 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 SNORA31.25-201ENST00000517242 134 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 MIR3126-201ENST00000577443 74 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 SNRPGP17-201ENST00000603780 214 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 AL359314.1-201ENST00000616913 261 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 DUXAP9-208ENST00000622815 614 ntBASIC1.87□□□□□ -2.11
NEDD8-MDP1E9PL57 Y_RNA.72-201ENST00000362894 103 ntBASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU4-56P-201ENST00000364700 142 ntBASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-1283P-201ENST00000365314 105 ntBASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-933P-201ENST00000384424 107 ntBASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 MT-TL1-201ENST00000386347 75 ntBASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 MIR1262-201ENST00000408276 93 ntBASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 MIR1294-201ENST00000408503 142 ntBASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 MTND3P8-201ENST00000412909 339 ntBASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 MTND4LP16-201ENST00000440828 295 ntBASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 AC079354.2-201ENST00000453523 154 ntBASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 PRELID3BP1-201ENST00000457142 540 ntBASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 snoU13.6-201ENST00000458785 104 ntBASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 EIF4A1P12-201ENST00000551910 141 ntBASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 AC109446.1-201ENST00000566172 220 ntBASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 AC093913.1-201ENST00000614178 329 ntBASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 SDR42E1P4-201ENST00000620894 481 ntBASIC1.86□□□□□ -2.11
NEDD8-MDP1E9PL57 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NEDD8-MDP1E9PL57 U3.9-201ENST00000363823 204 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms