Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 AL078595.3-201ENST00000623815 1166 ntBASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
TRAV12-1A0A0B4J245 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU6-1287P-201ENST00000362914 107 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU5F-6P-201ENST00000362979 116 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 RNY1P12-201ENST00000364251 105 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU4-76P-201ENST00000364509 141 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU6-53P-201ENST00000365367 106 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU6-1200P-201ENST00000384162 107 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU6-1060P-201ENST00000384664 107 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 MIR508-201ENST00000384857 115 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 MIR520E-201ENST00000384867 87 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 SNORA12.1-201ENST00000390873 148 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 MIR1253-201ENST00000408273 105 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 AL035398.1-201ENST00000430869 322 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 AL162395.1-201ENST00000457882 422 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 BNIP3P22-201ENST00000593399 556 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU4-5P-201ENST00000607255 135 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 AC138749.5-201ENST00000611461 208 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 AC005562.2-201ENST00000618264 111 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 AC011155.2-201ENST00000623202 216 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 U6.114-201ENST00000636407 96 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 U6.108-201ENST00000637764 58 ntBASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU6-169P-201ENST00000365336 107 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 SNORA20.2-201ENST00000383922 131 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 MIR10B-201ENST00000385011 110 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AL355796.1-201ENST00000406706 323 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AC084290.1-201ENST00000434995 374 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 snoU13.6-201ENST00000458785 104 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU7-21P-201ENST00000459430 62 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 MTCO2P6-201ENST00000463134 685 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AC079382.1-201ENST00000493346 557 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AC091951.3-201ENST00000504093 246 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AL391840.1-201ENST00000571144 367 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 MIR5006-201ENST00000583027 110 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AC146944.4-201ENST00000602697 718 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AC018714.1-201ENST00000605028 208 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AC097065.2-201ENST00000608159 533 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AP001596.2-201ENST00000608410 312 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AL513423.1-201ENST00000621695 132 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AL359697.1-201ENST00000624879 587 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 AC009541.1-201ENST00000438279 2662 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 MTND5P17-201ENST00000418405 1603 ntBASIC0.31□□□□□ -2.36
TRAV12-1A0A0B4J245 MIR373-201ENST00000362273 69 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU6-501P-201ENST00000364072 100 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 MIR660-201ENST00000385235 97 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 MIR653-201ENST00000385279 96 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU6-440P-201ENST00000390882 105 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 MIR1261-201ENST00000408659 82 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 MTCO2P23-201ENST00000425216 680 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 AL365184.2-201ENST00000431139 435 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 AC005002.2-201ENST00000438228 269 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 RPEP5-201ENST00000441137 268 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 AC004386.2-201ENST00000441858 148 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 NFU1P2-201ENST00000448700 469 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 AL513124.1-201ENST00000450410 614 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 snoU13.26-201ENST00000459452 105 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 Y_RNA.672-201ENST00000516289 104 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 RN7SKP265-201ENST00000516448 223 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU1-142P-201ENST00000516682 145 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 RN7SKP219-201ENST00000516825 296 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 MIR4778-201ENST00000577635 80 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 AC005771.1-201ENST00000585581 349 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 AP000811.1-201ENST00000603803 651 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 MIR6798-201ENST00000612887 67 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 AC073349.3-201ENST00000617616 186 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 AC009878.1-201ENST00000621819 340 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 AC022418.1-201ENST00000624118 445 ntBASIC0.3□□□□□ -2.36
TRAV12-1A0A0B4J245 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 SNORD114-27-201ENST00000363766 70 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU6-1335P-201ENST00000365426 107 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 SNORA75.2-201ENST00000391138 150 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 SNORA75.3-201ENST00000391231 150 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 AL034345.1-201ENST00000407768 123 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU6-57P-201ENST00000411348 103 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms