Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 Y_RNA.256-201ENST00000364594 104 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 RNU6-996P-201ENST00000365438 107 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 RNU6-26P-201ENST00000383985 107 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 MIR320A-201ENST00000385302 82 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 RNA5SP118-201ENST00000410385 109 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 RNA5SP401-201ENST00000515920 127 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 Y_RNA.704-201ENST00000516851 102 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 AL355297.2-201ENST00000604792 129 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 SNORD115-8-201ENST00000363856 82 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 RNU6-1141P-201ENST00000364520 107 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 RNU6-384P-201ENST00000364900 104 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 SNORD115-38-201ENST00000365037 82 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 SNORD73A-201ENST00000386062 65 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 SNORA16.2-201ENST00000390991 127 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 RNU2-32P-201ENST00000411193 191 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 FCF1P9-201ENST00000412546 282 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 AL445687.1-201ENST00000439946 251 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 AC007969.2-201ENST00000441891 191 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 RPL9P9-202ENST00000466501 579 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 AC008628.2-201ENST00000502605 298 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 RNU6-1223P-201ENST00000517124 104 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 CENPUP1-201ENST00000526649 1202 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 AC026371.1-201ENST00000551867 419 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 FGF7P1-201ENST00000582820 288 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SHANK1Q9Y566 AC097372.5-201ENST00000623665 376 ntBASIC1.28□□□□□ -2.2
SHANK1Q9Y566 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SHANK1Q9Y566 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.27□□□□□ -2.21
SHANK1Q9Y566 RNU1-22P-201ENST00000363334 158 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 RNU1-93P-201ENST00000364704 169 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 RNU4-12P-201ENST00000365233 139 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 RNU6-128P-201ENST00000383976 107 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 RNU6-611P-201ENST00000384276 104 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 MIR29B2-201ENST00000385055 81 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 RPS29P13-201ENST00000402041 169 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 EIF4EP4-201ENST00000424916 578 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 MTCO3P18-201ENST00000440206 761 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 MTND1P17-201ENST00000448961 204 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 RNU6-333P-201ENST00000459117 107 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 RNU7-167P-201ENST00000459160 62 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AC118273.2-201ENST00000532092 465 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 BNIP3P6-201ENST00000549284 499 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 IMMP1LP2-201ENST00000552954 492 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.27□□□□□ -2.21
SHANK1Q9Y566 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.27□□□□□ -2.21
SHANK1Q9Y566 MTATP6P3-201ENST00000581686 676 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AC091135.1-201ENST00000585943 307 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 Y_RNA.9-201ENST00000362354 101 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 Y_RNA.89-201ENST00000363031 102 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 RNU6-1090P-201ENST00000364065 94 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 MIR186-201ENST00000384988 86 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 MIR1304-201ENST00000408243 91 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 RN7SKP158-201ENST00000410453 326 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AC008267.5-201ENST00000424928 265 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 ERLEC1P1-201ENST00000433806 578 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AL161788.1-201ENST00000441805 169 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AL359672.1-201ENST00000442302 409 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AC083904.1-201ENST00000487828 231 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 MTCYBP18-201ENST00000501056 747 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 HMGB1P35-201ENST00000503360 598 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AC021146.2-201ENST00000504736 556 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AC091885.1-201ENST00000506658 268 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 Y_RNA.693-201ENST00000516641 110 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.27□□□□□ -2.21
SHANK1Q9Y566 MIR3122-201ENST00000577243 73 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 MIR3923-201ENST00000579521 83 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 MIR3136-201ENST00000583498 78 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AC005261.5-201ENST00000596280 355 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AL133216.2-202ENST00000634512 349 ntBASIC1.27□□□□□ -2.21
SHANK1Q9Y566 AC092268.1-201ENST00000342691 405 ntBASIC1.26□□□□□ -2.21
SHANK1Q9Y566 Y_RNA.2-201ENST00000362330 96 ntBASIC1.26□□□□□ -2.21
SHANK1Q9Y566 RNU6-1072P-201ENST00000384703 107 ntBASIC1.26□□□□□ -2.21
SHANK1Q9Y566 Y_RNA.573-201ENST00000384763 105 ntBASIC1.26□□□□□ -2.21
SHANK1Q9Y566 RNU6-443P-201ENST00000384780 107 ntBASIC1.26□□□□□ -2.21
SHANK1Q9Y566 MIR544A-201ENST00000384855 91 ntBASIC1.26□□□□□ -2.21
SHANK1Q9Y566 MIR29C-201ENST00000385231 88 ntBASIC1.26□□□□□ -2.21
SHANK1Q9Y566 EIF1P1-201ENST00000421436 341 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms