Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 RNU6-545P-201ENST00000362681 104 ntBASIC1.13□□□□□ -2.23
CLN6Q9NWW5 RNU6-1120P-201ENST00000362988 108 ntBASIC1.13□□□□□ -2.23
CLN6Q9NWW5 SNORA63D-201ENST00000364359 132 ntBASIC1.13□□□□□ -2.23
CLN6Q9NWW5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.13□□□□□ -2.23
CLN6Q9NWW5 MTATP6P18-201ENST00000417994 673 ntBASIC1.13□□□□□ -2.23
CLN6Q9NWW5 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.13□□□□□ -2.23
CLN6Q9NWW5 MTCO2P11-201ENST00000431069 680 ntBASIC1.13□□□□□ -2.23
CLN6Q9NWW5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.13□□□□□ -2.23
CLN6Q9NWW5 MTCO2P3-201ENST00000442543 421 ntBASIC1.13□□□□□ -2.23
CLN6Q9NWW5 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.13□□□□□ -2.23
CLN6Q9NWW5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.13□□□□□ -2.23
CLN6Q9NWW5 AC091435.1-201ENST00000505442 584 ntBASIC1.13□□□□□ -2.23
CLN6Q9NWW5 AC010486.2-201ENST00000505572 483 ntBASIC1.13□□□□□ -2.23
CLN6Q9NWW5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.13□□□□□ -2.23
CLN6Q9NWW5 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CLN6Q9NWW5 HIF1AP1-201ENST00000553642 175 ntBASIC1.13□□□□□ -2.23
CLN6Q9NWW5 MTATP6P3-201ENST00000581686 676 ntBASIC1.13□□□□□ -2.23
CLN6Q9NWW5 Z94722.1-201ENST00000604328 474 ntBASIC1.13□□□□□ -2.23
CLN6Q9NWW5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.13□□□□□ -2.23
CLN6Q9NWW5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.13□□□□□ -2.23
CLN6Q9NWW5 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.13□□□□□ -2.23
CLN6Q9NWW5 ZNF209P-201ENST00000593450 2304 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CLN6Q9NWW5 RNU6-418P-201ENST00000384035 107 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 MIR300-201ENST00000401138 83 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.12□□□□□ -2.23
CLN6Q9NWW5 AL445567.1-201ENST00000439121 144 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 AC132479.1-201ENST00000449160 144 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.12□□□□□ -2.23
CLN6Q9NWW5 RPS29P29-201ENST00000456396 171 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 SNORA59A-201ENST00000459326 152 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 RNU7-138P-201ENST00000459479 64 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 RPL30P7-201ENST00000479312 323 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.12□□□□□ -2.23
CLN6Q9NWW5 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.12□□□□□ -2.23
CLN6Q9NWW5 AP000873.5-201ENST00000533906 236 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 AL161670.1-201ENST00000554348 137 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 AC027807.1-201ENST00000559921 996 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.12□□□□□ -2.23
CLN6Q9NWW5 AL391840.1-201ENST00000571144 367 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 MIR4753-201ENST00000585119 83 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 CTHRC1P1-201ENST00000605383 469 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 AL050343.2-201ENST00000607338 280 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 AC109347.2-201ENST00000610220 349 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 AL078604.3-201ENST00000615580 211 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 AC008147.4-201ENST00000617570 1204 ntBASIC1.12□□□□□ -2.23
CLN6Q9NWW5 RNU6-562P-201ENST00000362731 107 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 RNU6-1065P-201ENST00000384513 106 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 RNU6-331P-201ENST00000384724 107 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 SNORD73A-201ENST00000386062 65 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 MIR1289-2-201ENST00000408360 111 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 MIR1283-1-201ENST00000408494 87 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.11□□□□□ -2.23
CLN6Q9NWW5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.11□□□□□ -2.23
CLN6Q9NWW5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.11□□□□□ -2.23
CLN6Q9NWW5 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.11□□□□□ -2.23
CLN6Q9NWW5 OR2AQ1P-201ENST00000451972 200 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 snoU13.6-201ENST00000458785 104 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 RNU7-63P-201ENST00000459054 62 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 snoU13.27-201ENST00000459278 104 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 AC004223.1-201ENST00000479840 271 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 AC067942.3-201ENST00000512025 362 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 AC011406.1-201ENST00000512440 370 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 RPL39P5-202ENST00000512505 151 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 RNU6-430P-201ENST00000517078 107 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.11□□□□□ -2.23
CLN6Q9NWW5 RAB11AP2-201ENST00000545905 639 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.11□□□□□ -2.23
CLN6Q9NWW5 AC019288.1-201ENST00000557918 224 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.11□□□□□ -2.23
CLN6Q9NWW5 AC040904.1-201ENST00000590850 223 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.11□□□□□ -2.23
CLN6Q9NWW5 AC126177.8-201ENST00000618339 1015 ntBASIC1.11□□□□□ -2.23
CLN6Q9NWW5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.1□□□□□ -2.23
CLN6Q9NWW5 MTND5P35-201ENST00000557537 1720 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 SNORA40.6-201ENST00000391153 128 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 AL117342.1-201ENST00000404861 406 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 AL161935.2-201ENST00000414627 60 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 AC060773.1-201ENST00000421698 310 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 MTCYBP8-201ENST00000422855 651 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.1□□□□□ -2.23
CLN6Q9NWW5 CST2P1-201ENST00000425770 87 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.1□□□□□ -2.23
CLN6Q9NWW5 AL513124.1-201ENST00000450410 614 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 RPL23AP94-201ENST00000512518 302 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 RNU2-34P-201ENST00000516534 121 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 RNA5SP384-201ENST00000516615 116 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 RNU6-612P-201ENST00000516909 102 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 DEFB131C-201ENST00000528817 165 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.1□□□□□ -2.23
CLN6Q9NWW5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.1□□□□□ -2.23
CLN6Q9NWW5 MTATP6P24-201ENST00000576835 677 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 AC015688.6-201ENST00000577737 104 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 MIR3660-201ENST00000584845 100 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 AL353149.1-201ENST00000610667 244 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 uc_338.34-201ENST00000617467 174 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 AC005562.2-201ENST00000618264 111 ntBASIC1.1□□□□□ -2.23
CLN6Q9NWW5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms