Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL079342.1-201ENST00000401460 267 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 MIR320B2-201ENST00000408479 138 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 EIF4EP2-201ENST00000422816 654 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 AL445646.1-201ENST00000431784 216 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 AL353705.4-201ENST00000449661 238 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 PMCHL2-203ENST00000457791 237 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 RNU6-717P-201ENST00000459076 104 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 RNU7-66P-201ENST00000459469 62 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 RNU1-41P-201ENST00000516161 162 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 RNU1-48P-201ENST00000516400 162 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 AP005660.1-201ENST00000522972 293 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 MIR5089-201ENST00000580047 84 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 AP003465.2-201ENST00000602571 373 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 MIR3688-2-201ENST00000636963 87 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 CBX3P1-201ENST00000325243 554 ntBASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 RNU6-1252P-201ENST00000363054 104 ntBASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 Y_RNA.135-201ENST00000363439 95 ntBASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 AC025033.1-201ENST00000463883 194 ntBASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 MRPS17P9-201ENST00000511924 393 ntBASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 RNU6-1098P-201ENST00000516772 96 ntBASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 AP005639.2-201ENST00000527592 928 ntBASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 POLR3GP2-201ENST00000588366 668 ntBASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 AC023043.2-201ENST00000589678 1026 ntBASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 AL773524.1-201ENST00000614065 229 ntBASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 AC005296.1-201ENST00000616145 209 ntBASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 AC091932.3-201ENST00000624223 323 ntBASIC2.26□□□□□ -2.05
BLOC1S4Q9NUP1 Y_RNA.212-201ENST00000364177 102 ntBASIC2.25□□□□□ -2.05
BLOC1S4Q9NUP1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.25□□□□□ -2.05
BLOC1S4Q9NUP1 AC244636.1-201ENST00000421152 228 ntBASIC2.25□□□□□ -2.05
BLOC1S4Q9NUP1 UBE2V1P8-201ENST00000437166 265 ntBASIC2.25□□□□□ -2.05
BLOC1S4Q9NUP1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.25□□□□□ -2.05
BLOC1S4Q9NUP1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.25□□□□□ -2.05
BLOC1S4Q9NUP1 RNU7-187P-201ENST00000458985 68 ntBASIC2.25□□□□□ -2.05
BLOC1S4Q9NUP1 ACA59.1-201ENST00000515966 143 ntBASIC2.25□□□□□ -2.05
BLOC1S4Q9NUP1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.25□□□□□ -2.05
BLOC1S4Q9NUP1 AC005786.1-201ENST00000588553 154 ntBASIC2.25□□□□□ -2.05
BLOC1S4Q9NUP1 SNRPGP19-201ENST00000603826 189 ntBASIC2.25□□□□□ -2.05
BLOC1S4Q9NUP1 MIR3662-201ENST00000637030 95 ntBASIC2.25□□□□□ -2.05
BLOC1S4Q9NUP1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.25□□□□□ -2.05
BLOC1S4Q9NUP1 RNA5SP493-201ENST00000364115 91 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 SNORA8-201ENST00000384574 139 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 RNU6-95P-201ENST00000384697 107 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 SNORD115-47-201ENST00000391226 86 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 MIR300-201ENST00000401138 83 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 AL356432.1-201ENST00000405809 419 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 MTND4LP16-201ENST00000440828 295 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 AC007395.1-201ENST00000451333 677 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 OR2AQ1P-201ENST00000451972 200 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 snoU13.6-201ENST00000458785 104 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 AC090255.1-201ENST00000495779 349 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 RNU6-1314P-201ENST00000517139 104 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 ANP32BP3-201ENST00000559213 706 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 MIR4299-201ENST00000577899 72 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 MIR4513-201ENST00000581077 86 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 AL096840.1-201ENST00000603287 93 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 MIR3976-201ENST00000606807 139 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 AC093913.1-201ENST00000614178 329 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 AC005562.2-201ENST00000618264 111 ntBASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
BLOC1S4Q9NUP1 Y_RNA.132-201ENST00000363421 102 ntBASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 RNA5SP37-201ENST00000365420 130 ntBASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 MIR597-201ENST00000384968 97 ntBASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 MIR1277-201ENST00000408536 78 ntBASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 AL513185.2-201ENST00000425543 193 ntBASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 AC016925.1-201ENST00000458303 298 ntBASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 AC130509.1-201ENST00000464158 433 ntBASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 TOMM22P6-201ENST00000465035 409 ntBASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 MTCYBP18-201ENST00000501056 747 ntBASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 ATP5EP1-201ENST00000510257 156 ntBASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 MIR3672-201ENST00000584290 82 ntBASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 SNRPGP20-201ENST00000604477 205 ntBASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 TCL6_2.1-201ENST00000615162 119 ntBASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 AC090617.10-201ENST00000624308 134 ntBASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 AC073869.6-201ENST00000640656 341 ntBASIC2.23□□□□□ -2.05
BLOC1S4Q9NUP1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 SNORD116-11-201ENST00000383882 92 ntBASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 SNORA48.1-201ENST00000390879 135 ntBASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 RN7SKP192-201ENST00000411291 327 ntBASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 SNRPEP8-201ENST00000442866 260 ntBASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 MTCO2P30-201ENST00000503662 364 ntBASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms