Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 SNORA12-201ENST00000391162 147 ntBASIC1.66□□□□□ -2.14
NANOGQ9H9S0 FGF7P8-201ENST00000402994 292 ntBASIC1.66□□□□□ -2.14
NANOGQ9H9S0 AP000275.1-201ENST00000411943 390 ntBASIC1.66□□□□□ -2.14
NANOGQ9H9S0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.66□□□□□ -2.14
NANOGQ9H9S0 AC003989.2-201ENST00000440224 169 ntBASIC1.66□□□□□ -2.14
NANOGQ9H9S0 FTH1P25-201ENST00000447665 469 ntBASIC1.66□□□□□ -2.14
NANOGQ9H9S0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.66□□□□□ -2.14
NANOGQ9H9S0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.66□□□□□ -2.14
NANOGQ9H9S0 RNU6-1037P-201ENST00000459571 107 ntBASIC1.66□□□□□ -2.14
NANOGQ9H9S0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.66□□□□□ -2.14
NANOGQ9H9S0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.66□□□□□ -2.14
NANOGQ9H9S0 AC116353.2-201ENST00000505332 712 ntBASIC1.66□□□□□ -2.14
NANOGQ9H9S0 AC096745.1-201ENST00000509945 370 ntBASIC1.66□□□□□ -2.14
NANOGQ9H9S0 Y_RNA.682-201ENST00000516457 100 ntBASIC1.66□□□□□ -2.14
NANOGQ9H9S0 RNA5SP454-201ENST00000517231 127 ntBASIC1.66□□□□□ -2.14
NANOGQ9H9S0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.66□□□□□ -2.14
NANOGQ9H9S0 HSPE1P4-201ENST00000550617 308 ntBASIC1.66□□□□□ -2.14
NANOGQ9H9S0 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.66□□□□□ -2.14
NANOGQ9H9S0 MIR7843-201ENST00000622274 79 ntBASIC1.66□□□□□ -2.14
NANOGQ9H9S0 AC009033.1-201ENST00000624279 431 ntBASIC1.66□□□□□ -2.14
NANOGQ9H9S0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
NANOGQ9H9S0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
NANOGQ9H9S0 RNU6-1141P-201ENST00000364520 107 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 RNU6-214P-201ENST00000384130 107 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 MIR487A-201ENST00000385009 80 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 MIR95-201ENST00000385072 81 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 CBX3P9-201ENST00000402326 552 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 RNU4-14P-201ENST00000410858 122 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 AC138393.2-201ENST00000414742 246 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.65□□□□□ -2.15
NANOGQ9H9S0 UBE2V1P4-201ENST00000425374 344 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 MTCO3P46-201ENST00000425787 232 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 HMGN2P3-201ENST00000433603 273 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.65□□□□□ -2.15
NANOGQ9H9S0 HMGN2P5-201ENST00000436882 273 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.65□□□□□ -2.15
NANOGQ9H9S0 MTND1P17-201ENST00000448961 204 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 AC130509.1-201ENST00000464158 433 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 MTND4P17-201ENST00000470444 350 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 HMGB1P35-201ENST00000503360 598 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 AC079140.5-201ENST00000507882 310 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 AL117351.2-201ENST00000513571 157 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 RNU6-566P-201ENST00000516790 107 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 SNORA31.25-201ENST00000517242 134 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 RNU2-19P-201ENST00000517288 84 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.65□□□□□ -2.15
NANOGQ9H9S0 IMMP1LP2-201ENST00000552954 492 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 AC233702.2-202ENST00000562547 291 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 AC104581.2-201ENST00000572227 430 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.65□□□□□ -2.15
NANOGQ9H9S0 AC078899.2-201ENST00000595282 212 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.65□□□□□ -2.15
NANOGQ9H9S0 AL133215.3-201ENST00000609801 448 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 AL627230.6-201ENST00000611129 280 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.65□□□□□ -2.15
NANOGQ9H9S0 AC007792.1-201ENST00000623023 402 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 AC090517.3-201ENST00000625170 141 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 SNORD98-201ENST00000636377 67 ntBASIC1.65□□□□□ -2.15
NANOGQ9H9S0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
NANOGQ9H9S0 CBX3P1-201ENST00000325243 554 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 RNU6-227P-201ENST00000362865 103 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 SNORD50.1-201ENST00000362987 71 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 Y_RNA.123-201ENST00000363338 102 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 Y_RNA.339-201ENST00000365325 102 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 RNU6-128P-201ENST00000383976 107 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 Y_RNA.504-201ENST00000384481 104 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 MIR9-3-201ENST00000385084 90 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 MIR549A-201ENST00000385268 96 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 SNORA26.3-201ENST00000391119 136 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 MIR1294-201ENST00000408503 142 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 MTND3P8-201ENST00000412909 339 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 AL590135.1-201ENST00000422215 156 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 AC019205.3-201ENST00000424573 156 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.64□□□□□ -2.15
NANOGQ9H9S0 Z82205.1-201ENST00000428456 297 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.64□□□□□ -2.15
NANOGQ9H9S0 AL133396.1-201ENST00000432048 687 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 RPS15AP10-201ENST00000432472 382 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 AL645568.3-201ENST00000433683 316 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 AC244670.1-201ENST00000436879 112 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 AC016700.2-201ENST00000446011 156 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.64□□□□□ -2.15
NANOGQ9H9S0 PMCHL2-203ENST00000457791 237 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 snoU13.6-201ENST00000458785 104 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 AC015911.1-201ENST00000495111 156 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 HMGN1P12-201ENST00000499125 195 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 MTND5P5-201ENST00000503764 376 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.64□□□□□ -2.15
NANOGQ9H9S0 MIR449C-201ENST00000516047 92 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 RNU7-30P-201ENST00000516835 62 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 SNORA20.3-201ENST00000516880 132 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.64□□□□□ -2.15
NANOGQ9H9S0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.64□□□□□ -2.15
NANOGQ9H9S0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.64□□□□□ -2.15
NANOGQ9H9S0 AC099654.14-201ENST00000638599 341 ntBASIC1.64□□□□□ -2.15
NANOGQ9H9S0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.64□□□□□ -2.15
NANOGQ9H9S0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.63□□□□□ -2.15
NANOGQ9H9S0 AC009541.1-201ENST00000438279 2662 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 RNU6-842P-201ENST00000384269 107 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 RNY3P14-201ENST00000384309 102 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 221.7 ms