Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 AC023141.11-201ENST00000508864 202 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 AC091874.1-201ENST00000511402 339 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 SMURF2P1-201ENST00000514992 481 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 RNA5SP200-201ENST00000516360 103 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 SNORA31.11-201ENST00000516528 139 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 Y_RNA.708-201ENST00000516950 96 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 SCARNA3-201ENST00000517097 143 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 Y_RNA.718-201ENST00000517110 102 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 MIR5690-201ENST00000583739 73 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 AC018889.1-201ENST00000605372 397 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 AP000654.2-201ENST00000605633 586 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 AC009229.3-201ENST00000608056 282 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 MIR8076-201ENST00000611401 83 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 AC084781.2-201ENST00000615568 161 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 PISRT1.1-201ENST00000616930 107 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 Z82209.1-201ENST00000422141 2135 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 RNU6-1188P-201ENST00000363795 107 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 Y_RNA.419-201ENST00000384041 102 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 RNU1-138P-201ENST00000384093 164 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 RNU6-842P-201ENST00000384269 107 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 RNU1-57P-201ENST00000384491 166 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 SNORD116-29-201ENST00000384516 83 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 MIR186-201ENST00000384988 86 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 U8.13-201ENST00000390842 128 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 SNORA11.4-201ENST00000408823 129 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 EIF4EP4-201ENST00000424916 578 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 AC008267.5-201ENST00000424928 265 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 RPL23AP95-201ENST00000426806 265 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 RPL30P4-201ENST00000429309 333 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 AL133396.1-201ENST00000432048 687 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 snoU13.14-201ENST00000459372 104 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 AC073901.1-201ENST00000462471 408 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 SNRPGP7-201ENST00000469016 106 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 RPL7P42-201ENST00000481005 679 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 MIR3199-1-201ENST00000582434 88 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 MIR5194-201ENST00000582634 120 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 AC011494.1-201ENST00000596454 237 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 AC078795.3-201ENST00000602913 472 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 AC073410.2-201ENST00000603240 332 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 AL356157.2-201ENST00000605122 111 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 KPNA2P1-201ENST00000458289 1591 ntBASIC2.32□□□□□ -2.04
RTP3Q9BQQ7 Y_RNA.2-201ENST00000362330 96 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 Y_RNA.11-201ENST00000362375 109 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 RNU6-212P-201ENST00000362642 104 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 RNU6-1141P-201ENST00000364520 107 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 Y_RNA.404-201ENST00000383978 102 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 RNU6-1072P-201ENST00000384703 107 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 RNU6-443P-201ENST00000384780 107 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 MIR524-201ENST00000385242 87 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 BTF3L4P2-201ENST00000392798 346 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 MTCYBP4-201ENST00000401524 249 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 CYCSP48-201ENST00000417124 323 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 MTCO2P27-201ENST00000420740 428 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 AIMP1P2-201ENST00000425294 312 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 DAP3P1-201ENST00000441522 278 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 RPL30P15-201ENST00000457129 321 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 AC114801.2-201ENST00000503825 781 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 ACA59.1-201ENST00000515966 143 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 AL050343.2-201ENST00000607338 280 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 AC126177.8-201ENST00000618339 1015 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 AC022140.2-201ENST00000623500 188 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 MIR203B-201ENST00000636080 86 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 AL669831.3-213ENST00000636676 183 ntBASIC2.31□□□□□ -2.04
RTP3Q9BQQ7 RNA5SP393-201ENST00000363423 117 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 SNORA67.1-201ENST00000364749 141 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 U3.13-201ENST00000364804 214 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 RNU6-310P-201ENST00000384655 107 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 RNU6-331P-201ENST00000384724 107 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 RNY4P36-201ENST00000391116 96 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 U6atac.2-201ENST00000408644 118 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 Y_RNA.646-201ENST00000410980 101 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 UBE2V1P7-201ENST00000446395 340 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 MTCO3P10-201ENST00000455912 772 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 Y_RNA.653-201ENST00000459091 95 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 AC080013.2-201ENST00000460866 323 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms