Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 MIR1294-201ENST00000408503 142 ntBASIC2.57□□□□□ -2
NPAS1Q99742 AC027124.2-201ENST00000428249 105 ntBASIC2.57□□□□□ -2
NPAS1Q99742 WARS2P1-201ENST00000429678 537 ntBASIC2.57□□□□□ -2
NPAS1Q99742 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.57□□□□□ -2
NPAS1Q99742 EEF1B2P7-201ENST00000451177 676 ntBASIC2.57□□□□□ -2
NPAS1Q99742 AC091826.1-201ENST00000514065 313 ntBASIC2.57□□□□□ -2
NPAS1Q99742 MIR3670-2-201ENST00000582974 65 ntBASIC2.57□□□□□ -2
NPAS1Q99742 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.57□□□□□ -2
NPAS1Q99742 MIR3670-1-201ENST00000584160 65 ntBASIC2.57□□□□□ -2
NPAS1Q99742 MIR3670-3-201ENST00000584855 65 ntBASIC2.57□□□□□ -2
NPAS1Q99742 MIR3670-4-201ENST00000612260 65 ntBASIC2.57□□□□□ -2
NPAS1Q99742 AL132822.1-201ENST00000617063 513 ntBASIC2.57□□□□□ -2
NPAS1Q99742 AL449363.1-201ENST00000617815 186 ntBASIC2.57□□□□□ -2
NPAS1Q99742 ZNF72P-201ENST00000425869 1908 ntBASIC2.57□□□□□ -2
NPAS1Q99742 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.57□□□□□ -2
NPAS1Q99742 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NPAS1Q99742 RNU6-222P-201ENST00000362438 107 ntBASIC2.56□□□□□ -2
NPAS1Q99742 Y_RNA.112-201ENST00000363250 102 ntBASIC2.56□□□□□ -2
NPAS1Q99742 RNU1-112P-201ENST00000364401 164 ntBASIC2.56□□□□□ -2
NPAS1Q99742 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.56□□□□□ -2
NPAS1Q99742 AL137792.2-201ENST00000443484 235 ntBASIC2.56□□□□□ -2
NPAS1Q99742 AC003982.1-202ENST00000469928 248 ntBASIC2.56□□□□□ -2
NPAS1Q99742 AL163540.1-201ENST00000485382 386 ntBASIC2.56□□□□□ -2
NPAS1Q99742 AC083906.5-201ENST00000503722 328 ntBASIC2.56□□□□□ -2
NPAS1Q99742 ANXA2P1-201ENST00000505539 926 ntBASIC2.56□□□□□ -2
NPAS1Q99742 RNA5SP54-201ENST00000516951 92 ntBASIC2.56□□□□□ -2
NPAS1Q99742 RNU6-58P-201ENST00000517143 103 ntBASIC2.56□□□□□ -2
NPAS1Q99742 AC022868.1-201ENST00000517767 391 ntBASIC2.56□□□□□ -2
NPAS1Q99742 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.56□□□□□ -2
NPAS1Q99742 MIR5695-201ENST00000579717 85 ntBASIC2.56□□□□□ -2
NPAS1Q99742 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.56□□□□□ -2
NPAS1Q99742 SNRPGP20-201ENST00000604477 205 ntBASIC2.56□□□□□ -2
NPAS1Q99742 AC005296.1-201ENST00000616145 209 ntBASIC2.56□□□□□ -2
NPAS1Q99742 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.56□□□□□ -2
NPAS1Q99742 Y_RNA.28-201ENST00000362554 111 ntBASIC2.55□□□□□ -2
NPAS1Q99742 RNU1-72P-201ENST00000362976 153 ntBASIC2.55□□□□□ -2
NPAS1Q99742 SNORA80A-201ENST00000363922 136 ntBASIC2.55□□□□□ -2
NPAS1Q99742 SNORA25.6-201ENST00000364121 118 ntBASIC2.55□□□□□ -2
NPAS1Q99742 RNU6-879P-201ENST00000364328 108 ntBASIC2.55□□□□□ -2
NPAS1Q99742 XGY1-201ENST00000381172 446 ntBASIC2.55□□□□□ -2
NPAS1Q99742 U8.10-201ENST00000384260 133 ntBASIC2.55□□□□□ -2
NPAS1Q99742 MIR512-1-201ENST00000384913 84 ntBASIC2.55□□□□□ -2
NPAS1Q99742 AL590004.1-201ENST00000405321 300 ntBASIC2.55□□□□□ -2
NPAS1Q99742 AL451074.5-201ENST00000415894 435 ntBASIC2.55□□□□□ -2
NPAS1Q99742 AL160004.2-201ENST00000432935 350 ntBASIC2.55□□□□□ -2
NPAS1Q99742 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.55□□□□□ -2
NPAS1Q99742 AC107083.1-201ENST00000439643 279 ntBASIC2.55□□□□□ -2
NPAS1Q99742 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.55□□□□□ -2
NPAS1Q99742 AP000870.1-201ENST00000472927 406 ntBASIC2.55□□□□□ -2
NPAS1Q99742 AC103975.1-201ENST00000482506 483 ntBASIC2.55□□□□□ -2
NPAS1Q99742 SCARNA13-201ENST00000516672 275 ntBASIC2.55□□□□□ -2
NPAS1Q99742 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.55□□□□□ -2
NPAS1Q99742 SNRPGP17-201ENST00000603780 214 ntBASIC2.55□□□□□ -2
NPAS1Q99742 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.55□□□□□ -2
NPAS1Q99742 AC007485.1-201ENST00000616755 206 ntBASIC2.55□□□□□ -2
NPAS1Q99742 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
NPAS1Q99742 AC096644.4-201ENST00000563417 2912 ntBASIC2.54□□□□□ -2
NPAS1Q99742 AC131280.1-202ENST00000624067 4211 ntBASIC2.54□□□□□ -2
NPAS1Q99742 RNU6-874P-201ENST00000362390 105 ntBASIC2.54□□□□□ -2
NPAS1Q99742 Y_RNA.132-201ENST00000363421 102 ntBASIC2.54□□□□□ -2
NPAS1Q99742 RNU6-280P-201ENST00000364145 104 ntBASIC2.54□□□□□ -2
NPAS1Q99742 Y_RNA.216-201ENST00000364205 93 ntBASIC2.54□□□□□ -2
NPAS1Q99742 RNA5SP125-201ENST00000364843 120 ntBASIC2.54□□□□□ -2
NPAS1Q99742 SNORA22B-201ENST00000383876 138 ntBASIC2.54□□□□□ -2
NPAS1Q99742 RNY1P14-201ENST00000384426 108 ntBASIC2.54□□□□□ -2
NPAS1Q99742 RPS26P42-201ENST00000413485 326 ntBASIC2.54□□□□□ -2
NPAS1Q99742 AC018865.2-201ENST00000423631 129 ntBASIC2.54□□□□□ -2
NPAS1Q99742 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.54□□□□□ -2
NPAS1Q99742 AC104389.3-201ENST00000445629 235 ntBASIC2.54□□□□□ -2
NPAS1Q99742 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.54□□□□□ -2
NPAS1Q99742 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.54□□□□□ -2
NPAS1Q99742 RN7SL297P-201ENST00000483161 293 ntBASIC2.54□□□□□ -2
NPAS1Q99742 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.54□□□□□ -2
NPAS1Q99742 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.54□□□□□ -2
NPAS1Q99742 SNORA25.10-201ENST00000515926 124 ntBASIC2.54□□□□□ -2
NPAS1Q99742 MIR449C-201ENST00000516047 92 ntBASIC2.54□□□□□ -2
NPAS1Q99742 SNORA25.14-201ENST00000516481 132 ntBASIC2.54□□□□□ -2
NPAS1Q99742 RNU6-965P-201ENST00000516721 96 ntBASIC2.54□□□□□ -2
NPAS1Q99742 SNORA31.15-201ENST00000516771 132 ntBASIC2.54□□□□□ -2
NPAS1Q99742 RN7SKP40-201ENST00000517211 242 ntBASIC2.54□□□□□ -2
NPAS1Q99742 AP003072.1-201ENST00000531740 145 ntBASIC2.54□□□□□ -2
NPAS1Q99742 AC020661.2-201ENST00000560114 134 ntBASIC2.54□□□□□ -2
NPAS1Q99742 UBL5P4-201ENST00000562584 236 ntBASIC2.54□□□□□ -2
NPAS1Q99742 AC006600.1-201ENST00000572529 153 ntBASIC2.54□□□□□ -2
NPAS1Q99742 AC090617.3-201ENST00000573670 475 ntBASIC2.54□□□□□ -2
NPAS1Q99742 AC016727.2-201ENST00000603988 621 ntBASIC2.54□□□□□ -2
NPAS1Q99742 AC016925.2-201ENST00000605108 242 ntBASIC2.54□□□□□ -2
NPAS1Q99742 AL353621.2-201ENST00000605340 133 ntBASIC2.54□□□□□ -2
NPAS1Q99742 AC005520.5-201ENST00000613926 164 ntBASIC2.54□□□□□ -2
NPAS1Q99742 FO624990.1-201ENST00000636373 85 ntBASIC2.54□□□□□ -2
NPAS1Q99742 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
NPAS1Q99742 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.54□□□□□ -2
NPAS1Q99742 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPAS1Q99742 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
NPAS1Q99742 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NPAS1Q99742 SNORA38-201ENST00000363946 132 ntBASIC2.53□□□□□ -2
NPAS1Q99742 RNU6-944P-201ENST00000364023 107 ntBASIC2.53□□□□□ -2
NPAS1Q99742 RNU6-743P-201ENST00000364151 106 ntBASIC2.53□□□□□ -2
NPAS1Q99742 RNU6-546P-201ENST00000383991 107 ntBASIC2.53□□□□□ -2
NPAS1Q99742 Y_RNA.496-201ENST00000384444 101 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms