Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AL353572.1-201ENST00000442490 417 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 RNU1-131P-201ENST00000458943 161 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 AC104435.1-201ENST00000483483 166 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 ATP5EP1-201ENST00000510257 156 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 RNU6-256P-201ENST00000516747 97 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 ANP32BP3-201ENST00000559213 706 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 AC005296.1-201ENST00000616145 209 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 AC137590.2-201ENST00000619709 240 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.32□□□□□ -2.04
SKA1Q96BD8 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SKA1Q96BD8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SKA1Q96BD8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SKA1Q96BD8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.31□□□□□ -2.04
SKA1Q96BD8 Y_RNA.89-201ENST00000363031 102 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 RNU6-784P-201ENST00000384330 106 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 EIF4EP2-201ENST00000422816 654 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 HMGN2P38-201ENST00000423806 265 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 MTCO3P18-201ENST00000440206 761 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 SNRPEP8-201ENST00000442866 260 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.31□□□□□ -2.04
SKA1Q96BD8 PCMTD1P1-201ENST00000455560 355 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 RNA5SP57-201ENST00000459463 123 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 AC091435.1-201ENST00000505442 584 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.31□□□□□ -2.04
SKA1Q96BD8 AC026470.2-201ENST00000561492 181 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.31□□□□□ -2.04
SKA1Q96BD8 DEFB122-202ENST00000569013 197 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 MIR5007-201ENST00000583098 95 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 AL096840.1-201ENST00000603287 93 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 AL590240.4-201ENST00000616908 390 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 AC091932.3-201ENST00000624223 323 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 AL359697.1-201ENST00000624879 587 ntBASIC2.31□□□□□ -2.04
SKA1Q96BD8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.31□□□□□ -2.04
SKA1Q96BD8 AL359851.1-201ENST00000569460 4997 ntBASIC2.3□□□□□ -2.04
SKA1Q96BD8 CBX3P1-201ENST00000325243 554 ntBASIC2.3□□□□□ -2.04
SKA1Q96BD8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SKA1Q96BD8 MIRLET7G-201ENST00000362280 84 ntBASIC2.3□□□□□ -2.04
SKA1Q96BD8 RNU6-562P-201ENST00000362731 107 ntBASIC2.3□□□□□ -2.04
SKA1Q96BD8 AL033519.2-201ENST00000403958 392 ntBASIC2.3□□□□□ -2.04
SKA1Q96BD8 RNA5SP501-201ENST00000410990 112 ntBASIC2.3□□□□□ -2.04
SKA1Q96BD8 RNU7-187P-201ENST00000458985 68 ntBASIC2.3□□□□□ -2.04
SKA1Q96BD8 TOMM22P6-201ENST00000465035 409 ntBASIC2.3□□□□□ -2.04
SKA1Q96BD8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.3□□□□□ -2.04
SKA1Q96BD8 AP005639.2-201ENST00000527592 928 ntBASIC2.3□□□□□ -2.04
SKA1Q96BD8 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.3□□□□□ -2.04
SKA1Q96BD8 MRPS36P4-201ENST00000534436 298 ntBASIC2.3□□□□□ -2.04
SKA1Q96BD8 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SKA1Q96BD8 RMST_6.1-201ENST00000611980 203 ntBASIC2.3□□□□□ -2.04
SKA1Q96BD8 AL138726.1-201ENST00000614873 333 ntBASIC2.3□□□□□ -2.04
SKA1Q96BD8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.3□□□□□ -2.04
SKA1Q96BD8 MIR6132-201ENST00000622083 109 ntBASIC2.3□□□□□ -2.04
SKA1Q96BD8 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.3□□□□□ -2.04
SKA1Q96BD8 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
SKA1Q96BD8 Y_RNA.295-201ENST00000364918 102 ntBASIC2.29□□□□□ -2.04
SKA1Q96BD8 Y_RNA.453-201ENST00000384223 109 ntBASIC2.29□□□□□ -2.04
SKA1Q96BD8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SKA1Q96BD8 MIR676-201ENST00000390702 67 ntBASIC2.29□□□□□ -2.04
SKA1Q96BD8 HMGN2P19-201ENST00000425149 265 ntBASIC2.29□□□□□ -2.04
SKA1Q96BD8 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.29□□□□□ -2.04
SKA1Q96BD8 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.29□□□□□ -2.04
SKA1Q96BD8 RNU7-66P-201ENST00000459469 62 ntBASIC2.29□□□□□ -2.04
SKA1Q96BD8 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.29□□□□□ -2.04
SKA1Q96BD8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.29□□□□□ -2.04
SKA1Q96BD8 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.29□□□□□ -2.04
SKA1Q96BD8 MIR3169-201ENST00000578032 83 ntBASIC2.29□□□□□ -2.04
SKA1Q96BD8 AC008749.1-201ENST00000597650 306 ntBASIC2.29□□□□□ -2.04
SKA1Q96BD8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.29□□□□□ -2.04
SKA1Q96BD8 MIR3976-201ENST00000606807 139 ntBASIC2.29□□□□□ -2.04
SKA1Q96BD8 AC005562.2-201ENST00000618264 111 ntBASIC2.29□□□□□ -2.04
SKA1Q96BD8 AC009033.1-201ENST00000624279 431 ntBASIC2.29□□□□□ -2.04
SKA1Q96BD8 AP000553.5-201ENST00000641933 54 ntBASIC2.29□□□□□ -2.04
SKA1Q96BD8 Y_RNA.6-201ENST00000362350 114 ntBASIC2.28□□□□□ -2.04
SKA1Q96BD8 Y_RNA.157-201ENST00000363638 102 ntBASIC2.28□□□□□ -2.04
SKA1Q96BD8 SNORD114-6-201ENST00000364393 72 ntBASIC2.28□□□□□ -2.04
SKA1Q96BD8 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.28□□□□□ -2.04
SKA1Q96BD8 SNORA18.2-201ENST00000383865 132 ntBASIC2.28□□□□□ -2.04
SKA1Q96BD8 RNU6-95P-201ENST00000384697 107 ntBASIC2.28□□□□□ -2.04
SKA1Q96BD8 AC139712.2-201ENST00000424302 339 ntBASIC2.28□□□□□ -2.04
SKA1Q96BD8 AC027124.2-201ENST00000428249 105 ntBASIC2.28□□□□□ -2.04
SKA1Q96BD8 DAP3P1-201ENST00000441522 278 ntBASIC2.28□□□□□ -2.04
SKA1Q96BD8 AC007395.1-201ENST00000451333 677 ntBASIC2.28□□□□□ -2.04
SKA1Q96BD8 snoU13.23-201ENST00000458863 104 ntBASIC2.28□□□□□ -2.04
SKA1Q96BD8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.28□□□□□ -2.04
SKA1Q96BD8 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.28□□□□□ -2.04
SKA1Q96BD8 POLR3GP2-201ENST00000588366 668 ntBASIC2.28□□□□□ -2.04
SKA1Q96BD8 AC005786.1-201ENST00000588553 154 ntBASIC2.28□□□□□ -2.04
SKA1Q96BD8 AC023043.2-201ENST00000589678 1026 ntBASIC2.28□□□□□ -2.04
SKA1Q96BD8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.05
SKA1Q96BD8 AC092881.1-201ENST00000638218 2733 ntBASIC2.27□□□□□ -2.05
SKA1Q96BD8 SNORD114-1-201ENST00000362705 72 ntBASIC2.27□□□□□ -2.05
SKA1Q96BD8 Y_RNA.132-201ENST00000363421 102 ntBASIC2.27□□□□□ -2.05
SKA1Q96BD8 Y_RNA.151-201ENST00000363566 112 ntBASIC2.27□□□□□ -2.05
SKA1Q96BD8 RNU6-534P-201ENST00000364877 106 ntBASIC2.27□□□□□ -2.05
SKA1Q96BD8 SNORA48.1-201ENST00000390879 135 ntBASIC2.27□□□□□ -2.05
SKA1Q96BD8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SKA1Q96BD8 MIR320B2-201ENST00000408479 138 ntBASIC2.27□□□□□ -2.05
SKA1Q96BD8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SKA1Q96BD8 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.27□□□□□ -2.05
SKA1Q96BD8 OR2AQ1P-201ENST00000451972 200 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms