Protein–RNA interactions for Protein: Q3L8U1

CHD9, Chromodomain-helicase-DNA-binding protein 9, humanhuman

Predictions only

Length 2,897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9Q3L8U1 AC091860.1-201ENST00000505723 432 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 RNU6-138P-201ENST00000515952 107 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 RNU6-287P-201ENST00000516230 98 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 RNA5SP134-201ENST00000516492 96 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.01□□□□□ -2.41
CHD9Q3L8U1 RNU4-5P-201ENST00000607255 135 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 AC009032.1-201ENST00000617574 431 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 RNU6-212P-201ENST00000362642 104 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 RNU6-1284P-201ENST00000363701 100 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 RNU6-343P-201ENST00000364709 104 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 RNU6-163P-201ENST00000384396 106 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 AL451046.2-201ENST00000403074 277 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.01□□□□□ -2.41
CHD9Q3L8U1 AC073261.1-201ENST00000429409 121 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 MTND4LP7-201ENST00000431728 294 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.01□□□□□ -2.41
CHD9Q3L8U1 RNU7-136P-201ENST00000458819 69 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.01□□□□□ -2.41
CHD9Q3L8U1 AC021146.9-201ENST00000512503 156 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 RNU2-53P-201ENST00000516257 147 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 MTND4LP26-201ENST00000518144 282 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 MRPS36P4-201ENST00000534436 298 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 BNIP3P6-201ENST00000549284 499 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 AL442163.3-201ENST00000554110 156 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 AC122134.1-202ENST00000569111 1201 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 ZNF92P2-201ENST00000600543 1059 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 AL391001.1-201ENST00000602747 715 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 Z99497.2-201ENST00000603634 310 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 AC018889.1-201ENST00000605372 397 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 AC121334.2-201ENST00000605387 271 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 MIR4320-201ENST00000636981 65 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 MTND4P5-201ENST00000435821 1374 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 CDR1-202ENST00000625883 1485 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 RNU6-655P-201ENST00000362858 107 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 SNORD44.1-201ENST00000363202 61 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 SNORA4.2-201ENST00000365313 147 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 MIR518A1-201ENST00000385068 85 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0□□□□□ -2.41
CHD9Q3L8U1 BTF3P11-201ENST00000426582 477 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0□□□□□ -2.41
CHD9Q3L8U1 AL133217.1-201ENST00000450980 425 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 RNU7-34P-201ENST00000459394 64 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0□□□□□ -2.41
CHD9Q3L8U1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0□□□□□ -2.41
CHD9Q3L8U1 RNU6-863P-201ENST00000515989 104 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0□□□□□ -2.41
CHD9Q3L8U1 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0□□□□□ -2.41
CHD9Q3L8U1 AL136520.1-202ENST00000555494 763 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 AL133153.1-201ENST00000557756 303 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0□□□□□ -2.41
CHD9Q3L8U1 SCARNA4-202ENST00000625402 129 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0□□□□□ -2.41
CHD9Q3L8U1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0□□□□□ -2.41
CHD9Q3L8U1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0□□□□□ -2.41
CHD9Q3L8U1 snoU2-30.2-201ENST00000362805 70 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 SNORD114-9-201ENST00000364370 72 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 AC083799.1-201ENST00000366451 910 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 RNU6-142P-201ENST00000384019 107 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 SNORD65C-201ENST00000390962 71 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 SNORA75.2-201ENST00000391138 150 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 SNORA75.3-201ENST00000391231 150 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 AL603865.2-201ENST00000401679 213 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 RAP1BP3-201ENST00000407180 549 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0□□□□□ -2.41
CHD9Q3L8U1 RPL23AP50-201ENST00000434149 455 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 DAP3P1-201ENST00000441522 278 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0□□□□□ -2.41
CHD9Q3L8U1 MTCO2P7-201ENST00000446518 666 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 RPL7P55-201ENST00000450522 746 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 AL049830.1-201ENST00000468034 425 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0□□□□□ -2.41
CHD9Q3L8U1 AC093809.1-201ENST00000509155 340 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 RN7SKP12-201ENST00000516275 143 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 AC078795.2-201ENST00000602835 1252 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 AC012507.3-201ENST00000603556 477 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 MIR15A-201ENST00000607334 83 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0□□□□□ -2.41
CHD9Q3L8U1 AC068647.2-201ENST00000637380 353 ntBASIC0□□□□□ -2.41
CHD9Q3L8U1 CASC19-280ENST00000642102 1351 ntBASIC-0□□□□□ -2.41
CHD9Q3L8U1 RNU6-97P-201ENST00000363387 104 ntBASIC-0□□□□□ -2.41
CHD9Q3L8U1 RNU6-674P-201ENST00000363831 107 ntBASIC-0□□□□□ -2.41
CHD9Q3L8U1 RNA5SP128-201ENST00000365305 116 ntBASIC-0□□□□□ -2.41
CHD9Q3L8U1 Y_RNA.363-201ENST00000365529 113 ntBASIC-0□□□□□ -2.41
CHD9Q3L8U1 RNU6-395P-201ENST00000365662 106 ntBASIC-0□□□□□ -2.41
CHD9Q3L8U1 Y_RNA.428-201ENST00000384078 102 ntBASIC-0□□□□□ -2.41
CHD9Q3L8U1 RNU6-166P-201ENST00000384371 107 ntBASIC-0□□□□□ -2.41
CHD9Q3L8U1 RAC1P8-201ENST00000427086 527 ntBASIC-0□□□□□ -2.41
CHD9Q3L8U1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0□□□□□ -2.41
CHD9Q3L8U1 TIMM9P1-201ENST00000436122 256 ntBASIC-0□□□□□ -2.41
CHD9Q3L8U1 MTCYBP39-201ENST00000437562 491 ntBASIC-0□□□□□ -2.41
CHD9Q3L8U1 MTCO3P18-201ENST00000440206 761 ntBASIC-0□□□□□ -2.41
CHD9Q3L8U1 ZNF886P-201ENST00000450781 723 ntBASIC-0□□□□□ -2.41
CHD9Q3L8U1 MTCO3P7-201ENST00000510008 774 ntBASIC-0□□□□□ -2.41
CHD9Q3L8U1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0□□□□□ -2.41
CHD9Q3L8U1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0□□□□□ -2.41
CHD9Q3L8U1 AC131055.1-201ENST00000584626 316 ntBASIC-0□□□□□ -2.41
CHD9Q3L8U1 RPL17P51-201ENST00000605218 238 ntBASIC-0□□□□□ -2.41
CHD9Q3L8U1 AC130324.3-201ENST00000614165 542 ntBASIC-0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms