Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 RNU6-527P-201ENST00000363425 104 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 Y_RNA.387-201ENST00000383918 102 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 RNU6-692P-201ENST00000384496 107 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 RNA5SP425-201ENST00000410336 112 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 DPH3P2-201ENST00000422618 250 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 AL133396.1-201ENST00000432048 687 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 AL353689.1-201ENST00000438895 199 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 DAP3P1-201ENST00000441522 278 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 AL353705.4-201ENST00000449661 238 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 PCMTD1P1-201ENST00000455560 355 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 U8.21-201ENST00000459536 136 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.74□□□□□ -2.13
CKAP4Q07065 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.74□□□□□ -2.13
CKAP4Q07065 RNU6-1016P-201ENST00000516689 94 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 RNU6-612P-201ENST00000516909 102 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 HSPE1P18-201ENST00000517602 280 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.74□□□□□ -2.13
CKAP4Q07065 AC093027.1-201ENST00000546698 429 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 MIR4795-201ENST00000584182 89 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 AC078795.3-201ENST00000602913 472 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 AL356157.2-201ENST00000605122 111 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 AC018462.2-201ENST00000605375 395 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 AC124303.1-201ENST00000605703 360 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 MIR6128-201ENST00000615528 109 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 AC024581.2-201ENST00000619986 252 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 AC097372.5-201ENST00000623665 376 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 AL359757.2-201ENST00000624309 274 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 AC241585.2-209ENST00000638217 143 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CKAP4Q07065 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.74□□□□□ -2.13
CKAP4Q07065 AC008555.8-201ENST00000623602 2168 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 AC131280.1-202ENST00000624067 4211 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 ZNF702P-202ENST00000434269 1966 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 AP000648.3-201ENST00000623539 4507 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CKAP4Q07065 RNU6-1010P-201ENST00000362757 107 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 SNORD32A-201ENST00000364805 84 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 MIR147B-201ENST00000390185 80 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CKAP4Q07065 EDDM3CP-201ENST00000415977 425 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 RPL23AP95-201ENST00000426806 265 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.73□□□□□ -2.13
CKAP4Q07065 MTND3P23-201ENST00000431980 347 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.73□□□□□ -2.13
CKAP4Q07065 RPL23AP3-201ENST00000453844 468 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 AL441985.1-201ENST00000457727 251 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 AP001324.2-201ENST00000461163 319 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 RPL23AP42-201ENST00000471152 471 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 AC018437.1-201ENST00000492214 406 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 AC008549.1-201ENST00000512900 643 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 RNU1-54P-201ENST00000517181 120 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 AC109329.1-201ENST00000518744 317 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.73□□□□□ -2.13
CKAP4Q07065 AP002770.2-201ENST00000543613 532 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.73□□□□□ -2.13
CKAP4Q07065 MIR4299-201ENST00000577899 72 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.73□□□□□ -2.13
CKAP4Q07065 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.73□□□□□ -2.13
CKAP4Q07065 AC018889.1-201ENST00000605372 397 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 AC019193.3-201ENST00000609144 554 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 MIR8076-201ENST00000611401 83 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 AL159153.1-201ENST00000619688 317 ntBASIC1.73□□□□□ -2.13
CKAP4Q07065 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CKAP4Q07065 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
CKAP4Q07065 RNU6-227P-201ENST00000362865 103 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 RNU6-1159P-201ENST00000362933 107 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 RNU6-1285P-201ENST00000363480 105 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 SNORD116-29-201ENST00000384516 83 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 RNU6-601P-201ENST00000384540 107 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 RNU6-1222P-201ENST00000384615 107 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 RNU6-306P-201ENST00000384617 107 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 RNU6-997P-201ENST00000384725 107 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 AL078595.1-201ENST00000404458 226 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 SNORA11-201ENST00000408789 128 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 RNU6-174P-201ENST00000410406 106 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 RNU2-23P-201ENST00000410545 195 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 RN7SKP223-201ENST00000410582 62 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 RN7SKP101-201ENST00000411376 320 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 AC096920.1-201ENST00000423991 241 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 USP9YP30-201ENST00000430729 455 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 FTH1P25-201ENST00000447665 469 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.72□□□□□ -2.13
CKAP4Q07065 Y_RNA.632-201ENST00000459189 102 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 snoU13.14-201ENST00000459372 104 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 AC114801.2-201ENST00000503825 781 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 ANXA2P1-201ENST00000505539 926 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CKAP4Q07065 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.72□□□□□ -2.13
CKAP4Q07065 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.72□□□□□ -2.13
CKAP4Q07065 AC079598.5-201ENST00000547460 117 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.72□□□□□ -2.13
CKAP4Q07065 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.72□□□□□ -2.13
CKAP4Q07065 FRG2DP-202ENST00000566967 323 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 MIR4765-201ENST00000585007 77 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.72□□□□□ -2.13
CKAP4Q07065 AC011494.1-201ENST00000596454 237 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 AC005034.5-201ENST00000604219 466 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 AP000654.2-201ENST00000605633 586 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms