| MUC1 | P15941 | EDDM3CP-201 | ENST00000415977 | 425 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | SNRPEP10-201 | ENST00000420249 | 274 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | MTND3P9-201 | ENST00000429526 | 346 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AL133396.1-201 | ENST00000432048 | 687 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | NDUFA5P4-201 | ENST00000436704 | 385 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AL603839.2-201 | ENST00000437060 | 546 nt | TSL 5 BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC116666.1-201 | ENST00000453915 | 551 nt | TSL 5 BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC107032.1-201 | ENST00000485945 | 480 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC117394.2-201 | ENST00000487827 | 323 nt | TSL 3 BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC145146.1-201 | ENST00000496370 | 254 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC022447.4-201 | ENST00000504053 | 364 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | LINC02064-201 | ENST00000506492 | 470 nt | TSL 5 BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC079467.1-201 | ENST00000508512 | 503 nt | TSL 3 BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | FAM206BP-201 | ENST00000510179 | 541 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC025465.4-201 | ENST00000513422 | 638 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | RNU6-612P-201 | ENST00000516909 | 102 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | RNU6-667P-201 | ENST00000517186 | 102 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | RN7SKP256-201 | ENST00000517201 | 314 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC034114.1-201 | ENST00000520293 | 285 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | IGLVVI-22-1-201 | ENST00000521183 | 211 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC092070.3-201 | ENST00000596041 | 337 nt | TSL 3 BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC078795.3-201 | ENST00000602913 | 472 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC080078.2-201 | ENST00000603766 | 501 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC007014.2-201 | ENST00000615581 | 479 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AL132822.1-201 | ENST00000617063 | 513 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| MUC1 | P15941 | CYSLTR1-203 | ENST00000614798 | 2681 nt | APPRIS P1 TSL 1 (best) BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | GLMN-201 | ENST00000370360 | 1995 nt | APPRIS P1 TSL 1 (best) BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | RMDN2-203 | ENST00000402091 | 1973 nt | TSL 2 BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | ZNF702P-202 | ENST00000434269 | 1966 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | SNORD113-7-201 | ENST00000363762 | 77 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | RNU6-546P-201 | ENST00000383991 | 107 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | RNU6-214P-201 | ENST00000384130 | 107 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | Y_RNA.504-201 | ENST00000384481 | 104 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | MIR29B2-201 | ENST00000385055 | 81 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AL590632.1-201 | ENST00000424289 | 371 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AL513185.2-201 | ENST00000425543 | 193 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC078809.1-201 | ENST00000427601 | 140 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AL359081.1-201 | ENST00000432083 | 615 nt | TSL 2 BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | USP9YP28-201 | ENST00000435142 | 589 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AL591501.1-201 | ENST00000439992 | 495 nt | TSL 5 BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | MTCO3P18-201 | ENST00000440206 | 761 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | RNU7-187P-201 | ENST00000458985 | 68 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | MAGI1-AS1-201 | ENST00000472514 | 591 nt | TSL 3 BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | FO393415.2-201 | ENST00000480085 | 343 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC096736.2-201 | ENST00000507972 | 175 nt | TSL 3 BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC110799.1-201 | ENST00000509098 | 449 nt | TSL 3 BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | MIR449C-201 | ENST00000516047 | 92 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC026371.1-201 | ENST00000551867 | 419 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | SCOCP1-201 | ENST00000554676 | 349 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC023906.2-201 | ENST00000558343 | 462 nt | TSL 3 BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC005909.1-201 | ENST00000577835 | 755 nt | TSL 3 BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC100830.2-201 | ENST00000581636 | 240 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | MIR3672-201 | ENST00000584290 | 82 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AP000907.4-201 | ENST00000604143 | 237 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AL356157.2-201 | ENST00000605122 | 111 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | MIR3662-201 | ENST00000637030 | 95 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC100810.6-201 | ENST00000638068 | 285 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC009541.1-201 | ENST00000438279 | 2662 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AP000560.1-201 | ENST00000624150 | 1937 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | SEMG1-201 | ENST00000372781 | 1662 nt | APPRIS P1 TSL 1 (best) BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | RNU6-227P-201 | ENST00000362865 | 103 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | RNU6-743P-201 | ENST00000364151 | 106 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | RNU6-142P-201 | ENST00000384019 | 107 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | Y_RNA.530-201 | ENST00000384587 | 101 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | RNU6-1106P-201 | ENST00000390845 | 107 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | SNORA26.3-201 | ENST00000391119 | 136 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | DEFB110-202 | ENST00000393660 | 189 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | Y_RNA.599-201 | ENST00000410489 | 109 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | FCF1P9-201 | ENST00000412546 | 282 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | UBE2V1P4-201 | ENST00000425374 | 344 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AP001043.2-201 | ENST00000434589 | 288 nt | TSL 3 BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AL360091.2-201 | ENST00000446847 | 650 nt | TSL 5 BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | MAMDC2-AS1-205 | ENST00000451488 | 317 nt | TSL 3 BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | MTND1P11-201 | ENST00000456661 | 876 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | snoU13.23-201 | ENST00000458863 | 104 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | RNU1-98P-201 | ENST00000458992 | 160 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC007547.1-201 | ENST00000462177 | 490 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC069439.1-201 | ENST00000494739 | 167 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC110009.1-201 | ENST00000512965 | 451 nt | TSL 5 BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | RNU6-256P-201 | ENST00000516747 | 97 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC107953.1-201 | ENST00000522216 | 297 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC100763.1-201 | ENST00000532735 | 522 nt | TSL 3 BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC022616.8-201 | ENST00000533569 | 253 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC007450.1-201 | ENST00000536492 | 188 nt | TSL 3 BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | NDUFA5P6-201 | ENST00000542110 | 379 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | MIR3126-201 | ENST00000577443 | 74 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | CPDP1-201 | ENST00000579660 | 283 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | RBBP8-210 | ENST00000581687 | 617 nt | TSL 2 BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | MIR3136-201 | ENST00000583498 | 78 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | MIR3942-201 | ENST00000585264 | 109 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | EAF1-AS1-207 | ENST00000599742 | 772 nt | TSL 5 BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | HTN1-205 | ENST00000610341 | 536 nt | APPRIS P1 TSL 1 (best) BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | MIR8081-201 | ENST00000611533 | 95 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AL138726.1-201 | ENST00000614873 | 333 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | MIR7843-201 | ENST00000622274 | 79 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | AC010722.1-201 | ENST00000622595 | 582 nt | TSL 5 BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | MIR1248-201 | ENST00000629190 | 106 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | CCDC148-202 | ENST00000409187 | 2523 nt | APPRIS P1 TSL 5 BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | MIPOL1-203 | ENST00000537471 | 5954 nt | APPRIS P1 TSL 5 BASIC | 1.37 | □□□□□ -2.19 | | |
| MUC1 | P15941 | SKIL-204 | ENST00000458537 | 7182 nt | APPRIS P1 TSL 1 (best) BASIC | 1.36 | □□□□□ -2.19 | | |