Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 Z98751.3-201ENST00000604447 521 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 PRELID3BP2-201ENST00000605362 201 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.22□□□□□ -2.37
CXCL1P09341 AC242852.1-201ENST00000612151 96 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 RNU6-1192P-201ENST00000612197 107 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 RNU6-489P-201ENST00000618289 107 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 AC244015.1-201ENST00000622301 99 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 RNU6-545P-201ENST00000362681 104 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 RNU4-76P-201ENST00000364509 141 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 Y_RNA.338-201ENST00000365320 114 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 Y_RNA.465-201ENST00000384293 102 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AC114491.1-201ENST00000416095 246 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.21□□□□□ -2.38
CXCL1P09341 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.21□□□□□ -2.38
CXCL1P09341 AC013470.1-201ENST00000453438 462 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AC022364.2-201ENST00000457963 554 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AL049830.1-201ENST00000468034 425 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AC016632.1-201ENST00000503994 196 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 MTND3P25-201ENST00000509243 135 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AC117522.1-201ENST00000509821 380 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 RNU6-948P-201ENST00000516374 107 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 RNA5SP134-201ENST00000516492 96 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AC090049.2-201ENST00000550377 109 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.21□□□□□ -2.38
CXCL1P09341 AC090517.1-201ENST00000569307 266 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 MIR3118-1-201ENST00000581787 76 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AC073539.2-201ENST00000597113 165 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AC136443.5-201ENST00000603741 370 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AC080078.2-201ENST00000603766 501 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AL357312.1-201ENST00000603879 298 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AL592221.1-201ENST00000605266 382 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AC064807.4-201ENST00000607201 407 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AL360219.1-201ENST00000610230 366 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AC093913.1-201ENST00000614178 329 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AL136221.1-201ENST00000621449 509 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AL359697.1-201ENST00000624879 587 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AL157786.1-207ENST00000627771 695 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 MIR6516-201ENST00000630554 81 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 MIR5087-201ENST00000635826 76 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AL450472.1-202ENST00000637286 180 ntBASIC0.21□□□□□ -2.38
CXCL1P09341 AC090625.1-201ENST00000357130 210 ntBASIC0.2□□□□□ -2.38
CXCL1P09341 MIR337-201ENST00000362281 93 ntBASIC0.2□□□□□ -2.38
CXCL1P09341 SNORD56.2-201ENST00000363242 71 ntBASIC0.2□□□□□ -2.38
CXCL1P09341 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
CXCL1P09341 SNORD116-13-201ENST00000384408 92 ntBASIC0.2□□□□□ -2.38
CXCL1P09341 MIR660-201ENST00000385235 97 ntBASIC0.2□□□□□ -2.38
CXCL1P09341 AL136310.1-201ENST00000404926 654 ntBASIC0.2□□□□□ -2.38
CXCL1P09341 AC007283.2-201ENST00000424739 197 ntBASIC0.2□□□□□ -2.38
CXCL1P09341 AC010154.1-201ENST00000425857 269 ntBASIC0.2□□□□□ -2.38
CXCL1P09341 AC098934.3-201ENST00000430450 190 ntBASIC0.2□□□□□ -2.38
CXCL1P09341 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.2□□□□□ -2.38
CXCL1P09341 AL133217.1-201ENST00000450980 425 ntBASIC0.2□□□□□ -2.38
CXCL1P09341 U7.7-201ENST00000459276 60 ntBASIC0.2□□□□□ -2.38
CXCL1P09341 SNRPGP7-201ENST00000469016 106 ntBASIC0.2□□□□□ -2.38
CXCL1P09341 MTATP6P15-201ENST00000527233 835 ntBASIC0.2□□□□□ -2.38
CXCL1P09341 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.2□□□□□ -2.38
CXCL1P09341 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.2□□□□□ -2.38
CXCL1P09341 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.2□□□□□ -2.38
CXCL1P09341 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
CXCL1P09341 AC008521.1-201ENST00000587471 187 ntBASIC0.2□□□□□ -2.38
CXCL1P09341 AL031775.1-201ENST00000607014 887 ntBASIC0.2□□□□□ -2.38
CXCL1P09341 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.2□□□□□ -2.38
CXCL1P09341 RNU6-552P-201ENST00000362869 119 ntBASIC0.19□□□□□ -2.38
CXCL1P09341 RNU1-119P-201ENST00000391122 165 ntBASIC0.19□□□□□ -2.38
CXCL1P09341 RPS29P13-201ENST00000402041 169 ntBASIC0.19□□□□□ -2.38
CXCL1P09341 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.19□□□□□ -2.38
CXCL1P09341 ISCA1P6-201ENST00000427740 390 ntBASIC0.19□□□□□ -2.38
CXCL1P09341 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.19□□□□□ -2.38
CXCL1P09341 AL606517.2-201ENST00000442855 241 ntBASIC0.19□□□□□ -2.38
CXCL1P09341 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.19□□□□□ -2.38
CXCL1P09341 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.19□□□□□ -2.38
CXCL1P09341 RPL39P39-201ENST00000455840 151 ntBASIC0.19□□□□□ -2.38
CXCL1P09341 RPS29P1-201ENST00000465274 159 ntBASIC0.19□□□□□ -2.38
CXCL1P09341 FABP5P5-201ENST00000515537 406 ntBASIC0.19□□□□□ -2.38
CXCL1P09341 AC106038.2-201ENST00000520706 568 ntBASIC0.19□□□□□ -2.38
CXCL1P09341 AC010376.1-201ENST00000522101 334 ntBASIC0.19□□□□□ -2.38
CXCL1P09341 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.19□□□□□ -2.38
CXCL1P09341 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.19□□□□□ -2.38
CXCL1P09341 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.19□□□□□ -2.38
CXCL1P09341 MIR4753-201ENST00000585119 83 ntBASIC0.19□□□□□ -2.38
CXCL1P09341 MIR4781-201ENST00000585250 76 ntBASIC0.19□□□□□ -2.38
CXCL1P09341 AC097478.2-201ENST00000610572 514 ntBASIC0.19□□□□□ -2.38
CXCL1P09341 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.19□□□□□ -2.38
CXCL1P09341 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.19□□□□□ -2.38
CXCL1P09341 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.19□□□□□ -2.38
CXCL1P09341 Y_RNA.287-201ENST00000364853 94 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 RNU6-336P-201ENST00000364891 107 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 RNU6-1335P-201ENST00000365426 107 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 RNU6-348P-201ENST00000384386 107 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 SNORA24.1-201ENST00000384401 135 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 SNORD116-12-201ENST00000384468 92 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 SNORD89-201ENST00000390981 114 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 SNORA75.2-201ENST00000391138 150 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 SNORA75.3-201ENST00000391231 150 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 AL034345.1-201ENST00000407768 123 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 MTCO2P12-201ENST00000427426 682 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 CALM2P2-201ENST00000428512 440 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms