Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AC068587.4-201ENST00000533893 186 ntBASIC0.49□□□□□ -2.33
PCF11O94913 AL121579.1-201ENST00000555129 305 ntBASIC0.49□□□□□ -2.33
PCF11O94913 AC005776.1-201ENST00000603164 290 ntBASIC0.49□□□□□ -2.33
PCF11O94913 AC073343.1-201ENST00000328239 651 ntBASIC0.48□□□□□ -2.33
PCF11O94913 RNU4-79P-201ENST00000362764 141 ntBASIC0.48□□□□□ -2.33
PCF11O94913 SNORA72.2-201ENST00000365028 127 ntBASIC0.48□□□□□ -2.33
PCF11O94913 RNU6-39P-201ENST00000384344 107 ntBASIC0.48□□□□□ -2.33
PCF11O94913 Y_RNA.476-201ENST00000384347 108 ntBASIC0.48□□□□□ -2.33
PCF11O94913 MTCYBP2-201ENST00000407745 171 ntBASIC0.48□□□□□ -2.33
PCF11O94913 AC092809.3-201ENST00000415453 231 ntBASIC0.48□□□□□ -2.33
PCF11O94913 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.48□□□□□ -2.33
PCF11O94913 USP9YP14-201ENST00000430663 563 ntBASIC0.48□□□□□ -2.33
PCF11O94913 MTND5P2-201ENST00000442927 1142 ntBASIC0.48□□□□□ -2.33
PCF11O94913 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.48□□□□□ -2.33
PCF11O94913 RPS23P5-201ENST00000495419 428 ntBASIC0.48□□□□□ -2.33
PCF11O94913 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.48□□□□□ -2.33
PCF11O94913 RNU5F-4P-201ENST00000516581 114 ntBASIC0.48□□□□□ -2.33
PCF11O94913 RNU6-165P-201ENST00000517170 99 ntBASIC0.48□□□□□ -2.33
PCF11O94913 MIR5692A1-201ENST00000580523 69 ntBASIC0.48□□□□□ -2.33
PCF11O94913 MIR4305-201ENST00000583252 102 ntBASIC0.48□□□□□ -2.33
PCF11O94913 AL354696.1-201ENST00000614652 497 ntBASIC0.48□□□□□ -2.33
PCF11O94913 AC008147.4-201ENST00000617570 1204 ntBASIC0.48□□□□□ -2.33
PCF11O94913 AC103706.2-201ENST00000638080 240 ntBASIC0.48□□□□□ -2.33
PCF11O94913 MTND4P14-201ENST00000435799 1354 ntBASIC0.47□□□□□ -2.33
PCF11O94913 RNU6-511P-201ENST00000363496 107 ntBASIC0.47□□□□□ -2.33
PCF11O94913 COX6CP6-201ENST00000490840 228 ntBASIC0.47□□□□□ -2.33
PCF11O94913 MTCO3P27-201ENST00000514397 196 ntBASIC0.47□□□□□ -2.33
PCF11O94913 RNU4-54P-201ENST00000516428 129 ntBASIC0.47□□□□□ -2.33
PCF11O94913 IGLVI-20-201ENST00000519296 130 ntBASIC0.47□□□□□ -2.33
PCF11O94913 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.47□□□□□ -2.33
PCF11O94913 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
PCF11O94913 AC108676.2-201ENST00000605225 163 ntBASIC0.47□□□□□ -2.33
PCF11O94913 AC104465.1-201ENST00000611365 139 ntBASIC0.47□□□□□ -2.33
PCF11O94913 AC091948.2-201ENST00000636510 279 ntBASIC0.47□□□□□ -2.33
PCF11O94913 RNA5SP361-201ENST00000362686 118 ntBASIC0.46□□□□□ -2.34
PCF11O94913 Y_RNA.124-201ENST00000363339 93 ntBASIC0.46□□□□□ -2.34
PCF11O94913 MIR942-201ENST00000401111 86 ntBASIC0.46□□□□□ -2.34
PCF11O94913 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.46□□□□□ -2.34
PCF11O94913 RNA5SP111-201ENST00000411386 101 ntBASIC0.46□□□□□ -2.34
PCF11O94913 RPS3AP1-201ENST00000413190 320 ntBASIC0.46□□□□□ -2.34
PCF11O94913 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.46□□□□□ -2.34
PCF11O94913 AC002486.1-201ENST00000435098 391 ntBASIC0.46□□□□□ -2.34
PCF11O94913 MTCO3P18-201ENST00000440206 761 ntBASIC0.46□□□□□ -2.34
PCF11O94913 SNRPGP12-201ENST00000449481 213 ntBASIC0.46□□□□□ -2.34
PCF11O94913 ART2BP-201ENST00000453501 499 ntBASIC0.46□□□□□ -2.34
PCF11O94913 MTCO3P7-201ENST00000510008 774 ntBASIC0.46□□□□□ -2.34
PCF11O94913 SNORA31.2-201ENST00000516019 134 ntBASIC0.46□□□□□ -2.34
PCF11O94913 RNU6-1041P-201ENST00000516254 102 ntBASIC0.46□□□□□ -2.34
PCF11O94913 AP001893.2-201ENST00000526949 202 ntBASIC0.46□□□□□ -2.34
PCF11O94913 Z83818.1-201ENST00000603584 150 ntBASIC0.46□□□□□ -2.34
PCF11O94913 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.46□□□□□ -2.34
PCF11O94913 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.46□□□□□ -2.34
PCF11O94913 SNORD98-201ENST00000636377 67 ntBASIC0.46□□□□□ -2.34
PCF11O94913 AC134026.1-201ENST00000623249 2239 ntBASIC0.45□□□□□ -2.34
PCF11O94913 RNU6-384P-201ENST00000364900 104 ntBASIC0.45□□□□□ -2.34
PCF11O94913 SNORA80D-201ENST00000384488 135 ntBASIC0.45□□□□□ -2.34
PCF11O94913 SNORA12.2-201ENST00000391040 156 ntBASIC0.45□□□□□ -2.34
PCF11O94913 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
PCF11O94913 AC078809.1-201ENST00000427601 140 ntBASIC0.45□□□□□ -2.34
PCF11O94913 AC105758.1-201ENST00000506038 399 ntBASIC0.45□□□□□ -2.34
PCF11O94913 SNORD79.1-201ENST00000516069 84 ntBASIC0.45□□□□□ -2.34
PCF11O94913 AC007834.2-201ENST00000536310 343 ntBASIC0.45□□□□□ -2.34
PCF11O94913 MIR544B-201ENST00000582372 78 ntBASIC0.45□□□□□ -2.34
PCF11O94913 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.45□□□□□ -2.34
PCF11O94913 AC105148.1-201ENST00000604961 409 ntBASIC0.45□□□□□ -2.34
PCF11O94913 AC131235.4-201ENST00000609288 620 ntBASIC0.45□□□□□ -2.34
PCF11O94913 uc_338.17-201ENST00000619633 179 ntBASIC0.45□□□□□ -2.34
PCF11O94913 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
PCF11O94913 RNA5SP98-201ENST00000363158 137 ntBASIC0.45□□□□□ -2.34
PCF11O94913 U3.9-201ENST00000363823 204 ntBASIC0.45□□□□□ -2.34
PCF11O94913 SNORD95.1-201ENST00000364099 68 ntBASIC0.45□□□□□ -2.34
PCF11O94913 RPS20P2-201ENST00000402520 389 ntBASIC0.45□□□□□ -2.34
PCF11O94913 HIGD1AP15-201ENST00000416198 280 ntBASIC0.45□□□□□ -2.34
PCF11O94913 RPS26P5-201ENST00000418544 335 ntBASIC0.45□□□□□ -2.34
PCF11O94913 AC016925.1-201ENST00000458303 298 ntBASIC0.45□□□□□ -2.34
PCF11O94913 AC074344.1-201ENST00000512823 224 ntBASIC0.45□□□□□ -2.34
PCF11O94913 AL590705.4-201ENST00000532209 134 ntBASIC0.45□□□□□ -2.34
PCF11O94913 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.45□□□□□ -2.34
PCF11O94913 AL356157.2-201ENST00000605122 111 ntBASIC0.45□□□□□ -2.34
PCF11O94913 AP000943.4-201ENST00000622912 357 ntBASIC0.45□□□□□ -2.34
PCF11O94913 Y_RNA.185-201ENST00000363894 100 ntBASIC0.44□□□□□ -2.34
PCF11O94913 RNU6-1141P-201ENST00000364520 107 ntBASIC0.44□□□□□ -2.34
PCF11O94913 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
PCF11O94913 RNU6-723P-201ENST00000383973 107 ntBASIC0.44□□□□□ -2.34
PCF11O94913 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.44□□□□□ -2.34
PCF11O94913 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.44□□□□□ -2.34
PCF11O94913 AC048334.1-201ENST00000477975 159 ntBASIC0.44□□□□□ -2.34
PCF11O94913 HMGN1P12-201ENST00000499125 195 ntBASIC0.44□□□□□ -2.34
PCF11O94913 RNA5SP255-201ENST00000516370 107 ntBASIC0.44□□□□□ -2.34
PCF11O94913 AL353149.1-201ENST00000610667 244 ntBASIC0.44□□□□□ -2.34
PCF11O94913 RNU6-78P-201ENST00000362897 107 ntBASIC0.43□□□□□ -2.34
PCF11O94913 RNU6-371P-201ENST00000364283 108 ntBASIC0.43□□□□□ -2.34
PCF11O94913 RNU6-923P-201ENST00000364753 107 ntBASIC0.43□□□□□ -2.34
PCF11O94913 RNU6-1026P-201ENST00000384465 108 ntBASIC0.43□□□□□ -2.34
PCF11O94913 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.43□□□□□ -2.34
PCF11O94913 AC245047.7-201ENST00000440265 293 ntBASIC0.43□□□□□ -2.34
PCF11O94913 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.43□□□□□ -2.34
PCF11O94913 AC011406.1-201ENST00000512440 370 ntBASIC0.43□□□□□ -2.34
PCF11O94913 RNU6-1146P-201ENST00000516282 102 ntBASIC0.43□□□□□ -2.34
PCF11O94913 MIR4493-201ENST00000584016 73 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms