Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MRPL42P6-201ENST00000486397 371 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 AIG1P1-201ENST00000503376 148 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 AC093023.1-201ENST00000547375 507 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 AC007375.1-201ENST00000554513 578 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 AC023043.3-201ENST00000593113 385 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 SNORA43.4-201ENST00000629559 138 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.15□□□□□ -1.91
CDKL5O76039 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDKL5O76039 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDKL5O76039 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CDKL5O76039 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CDKL5O76039 RNU6-1301P-201ENST00000362724 104 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 SNORA14A-201ENST00000364773 135 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 SNORA20.1-201ENST00000364790 130 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 RNU6-1027P-201ENST00000383998 107 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 Y_RNA.439-201ENST00000384119 94 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 MIR9-1-201ENST00000385198 89 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 NDUFS5P4-201ENST00000412983 318 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.14□□□□□ -1.91
CDKL5O76039 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.14□□□□□ -1.91
CDKL5O76039 AC007969.2-201ENST00000441891 191 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.14□□□□□ -1.91
CDKL5O76039 RNA5SP310-201ENST00000459084 116 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 HMGB3P17-201ENST00000504195 649 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 MIR2355-201ENST00000517199 87 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 AC022868.1-201ENST00000517767 391 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 MIR4300-201ENST00000581016 96 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 AC011476.5-201ENST00000615594 130 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 MIR376A1-201ENST00000616574 68 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 AC141273.2-201ENST00000618989 130 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 AC024581.2-201ENST00000619986 252 ntBASIC3.14□□□□□ -1.91
CDKL5O76039 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.14□□□□□ -1.91
CDKL5O76039 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
CDKL5O76039 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.14□□□□□ -1.91
CDKL5O76039 RNU6-858P-201ENST00000362436 107 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 MIR32-201ENST00000384965 70 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 SNORA48.2-201ENST00000390926 124 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 SNORD115-46-201ENST00000390982 71 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 AL079342.1-201ENST00000401460 267 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 RNU6-1245P-201ENST00000411130 106 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 AC074117.2-201ENST00000417130 397 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 RPL23AP95-201ENST00000426806 265 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.13□□□□□ -1.91
CDKL5O76039 RPL26P9-201ENST00000457466 433 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 AC087477.1-201ENST00000465747 340 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 AC090525.1-201ENST00000479116 478 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 HMGB1P35-201ENST00000503360 598 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 AC006445.2-201ENST00000510061 472 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 RNU6-581P-201ENST00000516214 105 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 RNU6-1012P-201ENST00000516606 109 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 RNU6-826P-201ENST00000516827 104 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 Y_RNA.713-201ENST00000517013 96 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 CR383656.8-201ENST00000549046 145 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 AL391261.3-201ENST00000557194 520 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 AL109918.3-201ENST00000603072 338 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.13□□□□□ -1.91
CDKL5O76039 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.13□□□□□ -1.91
CDKL5O76039 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CDKL5O76039 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDKL5O76039 Y_RNA.143-201ENST00000363520 106 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 SNORD115-32-201ENST00000364079 82 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 Y_RNA.237-201ENST00000364439 102 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 SNORD21-201ENST00000383953 95 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 SNORA29-201ENST00000384183 140 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 MIR592-201ENST00000384959 97 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.12□□□□□ -1.91
CDKL5O76039 RNU2-20P-201ENST00000410425 191 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 EIF1AXP1-201ENST00000419267 435 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 AC107083.1-201ENST00000439643 279 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.12□□□□□ -1.91
CDKL5O76039 AL590664.1-201ENST00000448065 339 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.12□□□□□ -1.91
CDKL5O76039 SNRPGP7-201ENST00000469016 106 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 AP000870.1-201ENST00000472927 406 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 RPS27AP9-201ENST00000477681 438 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 AC097462.2-201ENST00000504623 481 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.12□□□□□ -1.91
CDKL5O76039 SNORA31.1-201ENST00000515993 133 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 SNORA31.5-201ENST00000516190 133 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 SNORA31.21-201ENST00000517180 77 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.12□□□□□ -1.91
CDKL5O76039 AC023824.2-201ENST00000566185 400 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 MIR4635-201ENST00000583759 79 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.12□□□□□ -1.91
CDKL5O76039 AC010900.2-201ENST00000604508 210 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 AC019159.1-201ENST00000605094 187 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 RMST_6.1-201ENST00000611980 203 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.12□□□□□ -1.91
CDKL5O76039 AC240442.1-201ENST00000616055 283 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 AC002076.2-201ENST00000617362 122 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 AL137790.1-201ENST00000634283 177 ntBASIC3.12□□□□□ -1.91
CDKL5O76039 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.11□□□□□ -1.91
CDKL5O76039 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.11□□□□□ -1.91
CDKL5O76039 RNU1-112P-201ENST00000364401 164 ntBASIC3.11□□□□□ -1.91
CDKL5O76039 RNU6-1280P-201ENST00000365211 107 ntBASIC3.11□□□□□ -1.91
CDKL5O76039 SNORD78.2-201ENST00000391076 69 ntBASIC3.11□□□□□ -1.91
CDKL5O76039 FO393413.1-201ENST00000402892 195 ntBASIC3.11□□□□□ -1.91
CDKL5O76039 BPY2DP-201ENST00000422208 265 ntBASIC3.11□□□□□ -1.91
CDKL5O76039 AC105272.1-201ENST00000438604 198 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms