Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNU6-264P-201ENST00000517134 104 ntBASIC2.33□□□□□ -2.04
CACNA1FO60840 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.33□□□□□ -2.04
CACNA1FO60840 CBX3P8-201ENST00000532412 525 ntBASIC2.33□□□□□ -2.04
CACNA1FO60840 HSPE1P20-201ENST00000538133 289 ntBASIC2.33□□□□□ -2.04
CACNA1FO60840 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.33□□□□□ -2.04
CACNA1FO60840 MIR5089-201ENST00000580047 84 ntBASIC2.33□□□□□ -2.04
CACNA1FO60840 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.33□□□□□ -2.04
CACNA1FO60840 AL449363.1-201ENST00000617815 186 ntBASIC2.33□□□□□ -2.04
CACNA1FO60840 AL162373.1-201ENST00000620433 407 ntBASIC2.33□□□□□ -2.04
CACNA1FO60840 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.33□□□□□ -2.04
CACNA1FO60840 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CACNA1FO60840 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CACNA1FO60840 Y_RNA.39-201ENST00000362620 98 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 RNU6-490P-201ENST00000362985 107 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 RNU6-196P-201ENST00000384315 107 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 RNU6-95P-201ENST00000384697 107 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 Y_RNA.577-201ENST00000384794 101 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 AC243428.1-201ENST00000421099 264 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 AC098614.2-201ENST00000426040 255 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 MTCYBP9-201ENST00000431021 303 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.32□□□□□ -2.04
CACNA1FO60840 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.32□□□□□ -2.04
CACNA1FO60840 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.32□□□□□ -2.04
CACNA1FO60840 AL078601.1-201ENST00000444542 271 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.32□□□□□ -2.04
CACNA1FO60840 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.32□□□□□ -2.04
CACNA1FO60840 HSPE1P7-201ENST00000604681 321 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 MAPK10-266ENST00000641066 6555 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 RNU6-1180P-201ENST00000364935 107 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 AC117470.1-201ENST00000381974 330 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 RNU6-310P-201ENST00000384655 107 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 USMG5P1-201ENST00000425964 177 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 HMGB1P9-201ENST00000429856 646 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 AC010099.1-201ENST00000455434 375 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 AC015911.1-201ENST00000495111 156 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 AC090255.1-201ENST00000495779 349 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 RNA5SP458-201ENST00000516188 119 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 MIR4782-201ENST00000577987 79 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 AC004805.2-201ENST00000605382 482 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 AC087588.2-201ENST00000617667 426 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 AC026241.1-201ENST00000517873 2142 ntBASIC2.32□□□□□ -2.04
CACNA1FO60840 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CACNA1FO60840 Y_RNA.148-201ENST00000363557 117 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 RNU6-1059P-201ENST00000363752 98 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 SNORA63.7-201ENST00000365579 123 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 RNU6-541P-201ENST00000384709 110 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 MIR627-201ENST00000384979 97 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 RPL21P75-201ENST00000396599 483 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 RPL21P28-201ENST00000401418 483 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 RNU2-25P-201ENST00000411041 191 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 Z96811.1-201ENST00000445880 108 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 OR2AQ1P-201ENST00000451972 200 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 RPL12P25-201ENST00000455592 494 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 RPL21P39-201ENST00000463605 483 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.31□□□□□ -2.04
CACNA1FO60840 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.31□□□□□ -2.04
CACNA1FO60840 AC093591.1-201ENST00000491435 481 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 RPL21P16-201ENST00000495531 483 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.31□□□□□ -2.04
CACNA1FO60840 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.31□□□□□ -2.04
CACNA1FO60840 RAC1P5-201ENST00000512182 576 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.31□□□□□ -2.04
CACNA1FO60840 HSBP1P1-201ENST00000555205 166 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 VN1R107P-201ENST00000601784 209 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 AC006006.1-201ENST00000603082 144 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 AL121655.1-201ENST00000605811 308 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 Y_RNA.783-201ENST00000613546 102 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 AC007792.1-201ENST00000623023 402 ntBASIC2.31□□□□□ -2.04
CACNA1FO60840 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.31□□□□□ -2.04
CACNA1FO60840 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.31□□□□□ -2.04
CACNA1FO60840 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CACNA1FO60840 Y_RNA.33-201ENST00000362591 102 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 Y_RNA.152-201ENST00000363578 100 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 RNU6-1303P-201ENST00000364841 107 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CACNA1FO60840 RNA5SP354-201ENST00000391247 136 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 SNORD56-201ENST00000413522 71 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.3□□□□□ -2.04
CACNA1FO60840 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 MTCO3P8-201ENST00000453691 755 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 SNORD13-201ENST00000459299 104 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.3□□□□□ -2.04
CACNA1FO60840 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.3□□□□□ -2.04
CACNA1FO60840 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CACNA1FO60840 COX6CP5-201ENST00000527162 228 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.3□□□□□ -2.04
CACNA1FO60840 AC104581.2-201ENST00000572227 430 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 MIR5696-201ENST00000578474 85 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 MIR3149-201ENST00000584629 83 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 AL138825.1-201ENST00000618587 192 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 AC091925.1-201ENST00000623204 462 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.3□□□□□ -2.04
CACNA1FO60840 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.3□□□□□ -2.04
CACNA1FO60840 RNY1P16-201ENST00000363063 111 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 SNORD14B-201ENST00000364533 90 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 RNU1-115P-201ENST00000365329 160 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 Y_RNA.424-201ENST00000384063 103 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 RNU6-217P-201ENST00000384164 104 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 BTF3L4P2-201ENST00000392798 346 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 MIR1323-201ENST00000408090 73 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms