Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNA5SP458-201ENST00000516188 119 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 AL512360.1-201ENST00000555346 234 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 AL118558.2-201ENST00000556294 238 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 CYP4A27P-201ENST00000567218 190 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 MIR3122-201ENST00000577243 73 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 AC243960.4-201ENST00000600532 288 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 AC078795.3-201ENST00000602913 472 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 AL109918.3-201ENST00000603072 338 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 AP000942.3-201ENST00000603702 160 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 AL022345.1-201ENST00000607292 135 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 AL357078.3-201ENST00000607528 618 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 RNU1-58P-201ENST00000362413 163 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 RNU6-234P-201ENST00000365229 104 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 RNU4-20P-201ENST00000365601 151 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 RPL31P63-201ENST00000422565 375 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 RNU6-1208P-201ENST00000459588 107 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 AC091874.1-201ENST00000511402 339 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 SNORA19.2-201ENST00000516013 114 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 MIR449C-201ENST00000516047 92 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 SNORD60.2-201ENST00000516883 86 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 RNU6-612P-201ENST00000516909 102 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 RNA5SP490-201ENST00000517141 136 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 AP005597.4-201ENST00000526762 229 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 CBX3P4-201ENST00000538909 354 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 AC025423.5-201ENST00000550230 219 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 AC109446.1-201ENST00000566172 220 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 AC104581.2-201ENST00000572227 430 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 AL078605.1-201ENST00000603529 500 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 CYP2C61P-201ENST00000604072 290 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 Z98751.3-201ENST00000604447 521 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 AC092807.2-201ENST00000609367 243 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 PCGEM1.1-201ENST00000613431 131 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 AL773524.1-201ENST00000614065 229 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 U1.36-201ENST00000620684 176 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 AL136221.1-201ENST00000621449 509 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 AC233981.2-201ENST00000611524 1614 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.5□□□□□ -2.17
CLCF1Q9UBD9 AC009541.1-201ENST00000438279 2662 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 EIF4E2P1-201ENST00000393781 255 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 RPL23AP6-201ENST00000446637 472 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 HMGN2P18-201ENST00000450680 270 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 U8.21-201ENST00000459536 136 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 AC114801.2-201ENST00000503825 781 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 AC019235.1-201ENST00000503847 207 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 AC005741.1-201ENST00000511094 432 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 AP005660.1-201ENST00000522972 293 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 EIF4A1P12-201ENST00000551910 141 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 MIR4299-201ENST00000577899 72 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 MIR5692C1-201ENST00000585309 91 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 AC103591.3-201ENST00000608684 209 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 AC068944.2-201ENST00000610373 403 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 AL121757.2-201ENST00000611223 313 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 AL450472.1-202ENST00000637286 180 ntBASIC1.49□□□□□ -2.17
CLCF1Q9UBD9 MTND4P23-201ENST00000447723 1363 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 RNU6-227P-201ENST00000362865 103 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 RNU6-457P-201ENST00000363999 107 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 RNU4-24P-201ENST00000364565 139 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 RNU6-1329P-201ENST00000365664 107 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 RNU6-214P-201ENST00000384130 107 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 RNU6-160P-201ENST00000384591 107 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 MIR514A2-201ENST00000385131 88 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 MIR514A3-201ENST00000385132 88 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 MIR676-201ENST00000390702 67 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 SNORA67.5-201ENST00000391036 107 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 RNA5SP212-201ENST00000391223 107 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 AC244636.1-201ENST00000421152 228 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 AC012306.1-201ENST00000423267 114 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 HMGN2P19-201ENST00000425149 265 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 SEPT14P3-201ENST00000439401 183 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 AL359672.1-201ENST00000442302 409 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 AL732372.2-207ENST00000445840 183 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 SEPT14P2-201ENST00000453405 183 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms