Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC007375.1-201ENST00000554513 578 ntBASIC2.16□□□□□ -2.06
CDCA3Q99618 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.16□□□□□ -2.06
CDCA3Q99618 AL356157.2-201ENST00000605122 111 ntBASIC2.16□□□□□ -2.06
CDCA3Q99618 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDCA3Q99618 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CDCA3Q99618 AC009541.1-201ENST00000438279 2662 ntBASIC2.15□□□□□ -2.06
CDCA3Q99618 CBX3P1-201ENST00000325243 554 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 Y_RNA.164-201ENST00000363709 102 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 SNORA38-201ENST00000363946 132 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 RNU6-933P-201ENST00000384424 107 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 RNU6-790P-201ENST00000384479 105 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 Y_RNA.504-201ENST00000384481 104 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 MIR521-1-201ENST00000384902 87 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 AL590135.1-201ENST00000422215 156 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 AC019205.3-201ENST00000424573 156 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 AC078809.1-201ENST00000427601 140 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.15□□□□□ -2.07
CDCA3Q99618 AC016700.2-201ENST00000446011 156 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.15□□□□□ -2.07
CDCA3Q99618 PPP1R2P5-201ENST00000457256 603 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 AC130509.1-201ENST00000464158 433 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 AC015911.1-201ENST00000495111 156 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.15□□□□□ -2.07
CDCA3Q99618 RNU6-566P-201ENST00000516790 107 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.15□□□□□ -2.07
CDCA3Q99618 CPDP1-201ENST00000579660 283 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 MIR3976-201ENST00000606807 139 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 AC063943.3-201ENST00000615562 356 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 AC008121.3-201ENST00000618726 433 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 AL133216.2-202ENST00000634512 349 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 SNORD98-201ENST00000636377 67 ntBASIC2.15□□□□□ -2.07
CDCA3Q99618 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.15□□□□□ -2.07
CDCA3Q99618 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
CDCA3Q99618 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDCA3Q99618 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
CDCA3Q99618 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
CDCA3Q99618 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDCA3Q99618 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.14□□□□□ -2.07
CDCA3Q99618 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDCA3Q99618 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.14□□□□□ -2.07
CDCA3Q99618 Y_RNA.72-201ENST00000362894 103 ntBASIC2.14□□□□□ -2.07
CDCA3Q99618 Y_RNA.135-201ENST00000363439 95 ntBASIC2.14□□□□□ -2.07
CDCA3Q99618 RNU6-1283P-201ENST00000365314 105 ntBASIC2.14□□□□□ -2.07
CDCA3Q99618 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.14□□□□□ -2.07
CDCA3Q99618 RPL23AP95-201ENST00000426806 265 ntBASIC2.14□□□□□ -2.07
CDCA3Q99618 AL133396.1-201ENST00000432048 687 ntBASIC2.14□□□□□ -2.07
CDCA3Q99618 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.14□□□□□ -2.07
CDCA3Q99618 AL139109.1-201ENST00000455491 297 ntBASIC2.14□□□□□ -2.07
CDCA3Q99618 PCMTD1P1-201ENST00000455560 355 ntBASIC2.14□□□□□ -2.07
CDCA3Q99618 AC104564.1-201ENST00000493028 407 ntBASIC2.14□□□□□ -2.07
CDCA3Q99618 HMGB1P35-201ENST00000503360 598 ntBASIC2.14□□□□□ -2.07
CDCA3Q99618 SNORA31.16-201ENST00000516773 139 ntBASIC2.14□□□□□ -2.07
CDCA3Q99618 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.14□□□□□ -2.07
CDCA3Q99618 AC087241.2-201ENST00000535801 324 ntBASIC2.14□□□□□ -2.07
CDCA3Q99618 IMMP1LP2-201ENST00000552954 492 ntBASIC2.14□□□□□ -2.07
CDCA3Q99618 AC110588.1-201ENST00000559699 137 ntBASIC2.14□□□□□ -2.07
CDCA3Q99618 MIR4742-201ENST00000581069 85 ntBASIC2.14□□□□□ -2.07
CDCA3Q99618 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CDCA3Q99618 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.14□□□□□ -2.07
CDCA3Q99618 WWP1P1-201ENST00000466609 2769 ntBASIC2.14□□□□□ -2.07
CDCA3Q99618 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CDCA3Q99618 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CDCA3Q99618 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CDCA3Q99618 FGF7P8-201ENST00000402994 292 ntBASIC2.13□□□□□ -2.07
CDCA3Q99618 RN7SKP61-201ENST00000410642 295 ntBASIC2.13□□□□□ -2.07
CDCA3Q99618 MTND3P8-201ENST00000412909 339 ntBASIC2.13□□□□□ -2.07
CDCA3Q99618 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.13□□□□□ -2.07
CDCA3Q99618 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.13□□□□□ -2.07
CDCA3Q99618 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.13□□□□□ -2.07
CDCA3Q99618 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.13□□□□□ -2.07
CDCA3Q99618 GPM6BP3-201ENST00000442797 145 ntBASIC2.13□□□□□ -2.07
CDCA3Q99618 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.13□□□□□ -2.07
CDCA3Q99618 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.13□□□□□ -2.07
CDCA3Q99618 RN7SKP210-201ENST00000459176 261 ntBASIC2.13□□□□□ -2.07
CDCA3Q99618 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.13□□□□□ -2.07
CDCA3Q99618 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.13□□□□□ -2.07
CDCA3Q99618 AC114801.2-201ENST00000503825 781 ntBASIC2.13□□□□□ -2.07
CDCA3Q99618 AC016632.1-201ENST00000503994 196 ntBASIC2.13□□□□□ -2.07
CDCA3Q99618 AC022447.4-201ENST00000504053 364 ntBASIC2.13□□□□□ -2.07
CDCA3Q99618 PRDX4P1-201ENST00000507189 574 ntBASIC2.13□□□□□ -2.07
CDCA3Q99618 Y_RNA.682-201ENST00000516457 100 ntBASIC2.13□□□□□ -2.07
CDCA3Q99618 RNA5SP454-201ENST00000517231 127 ntBASIC2.13□□□□□ -2.07
CDCA3Q99618 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.13□□□□□ -2.07
CDCA3Q99618 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.13□□□□□ -2.07
CDCA3Q99618 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.13□□□□□ -2.07
CDCA3Q99618 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.13□□□□□ -2.07
CDCA3Q99618 RBM11P1-201ENST00000604951 799 ntBASIC2.13□□□□□ -2.07
CDCA3Q99618 AC019193.3-201ENST00000609144 554 ntBASIC2.13□□□□□ -2.07
CDCA3Q99618 AL133215.3-201ENST00000609801 448 ntBASIC2.13□□□□□ -2.07
CDCA3Q99618 Y_RNA.783-201ENST00000613546 102 ntBASIC2.13□□□□□ -2.07
CDCA3Q99618 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.13□□□□□ -2.07
CDCA3Q99618 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDCA3Q99618 Y_RNA.123-201ENST00000363338 102 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 Y_RNA.390-201ENST00000383932 102 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 RNU6-767P-201ENST00000384132 107 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 RNU1-52P-201ENST00000384190 164 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 SNORA36A-201ENST00000384221 132 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 RNU6-1274P-201ENST00000384557 107 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 MIR95-201ENST00000385072 81 ntBASIC2.12□□□□□ -2.07
CDCA3Q99618 AL591034.2-201ENST00000402839 359 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms