Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 MIR934-201ENST00000401241 83 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 CBX3P9-201ENST00000402326 552 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 SNORA3.2-201ENST00000408221 125 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 MIR1262-201ENST00000408276 93 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 MIR1277-201ENST00000408536 78 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 SNRPEP10-201ENST00000420249 274 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 EIF1P1-201ENST00000421436 341 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 AL139415.2-201ENST00000431968 163 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 RPS15AP10-201ENST00000432472 382 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 AC003989.2-201ENST00000440224 169 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 AL161788.1-201ENST00000441805 169 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 MTCO2P3-201ENST00000442543 421 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.39□□□□□ -2.19
LINC00477Q96M19 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.39□□□□□ -2.19
LINC00477Q96M19 AC008549.1-201ENST00000512900 643 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 AC025465.4-201ENST00000513422 638 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 RNU4-49P-201ENST00000516080 140 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 RNU6-256P-201ENST00000516747 97 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.39□□□□□ -2.19
LINC00477Q96M19 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.39□□□□□ -2.19
LINC00477Q96M19 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.39□□□□□ -2.19
LINC00477Q96M19 AC024614.2-201ENST00000577584 372 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 MIR3198-2-201ENST00000577868 80 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 CPDP1-201ENST00000579660 283 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 MIR4435-1-201ENST00000582552 80 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 MIR3941-201ENST00000582572 103 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 MIR4713-201ENST00000582691 75 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.39□□□□□ -2.19
LINC00477Q96M19 AC010928.2-201ENST00000588017 287 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 AC002553.4-201ENST00000616896 331 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 AL132822.1-201ENST00000617063 513 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 AC006504.8-201ENST00000621046 635 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 AC064859.1-201ENST00000624741 174 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 SNORD50.1-201ENST00000362987 71 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 RNU6-743P-201ENST00000364151 106 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 RNU4-42P-201ENST00000364738 142 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 SNORA25B-201ENST00000365507 128 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 RNU6-877P-201ENST00000383868 107 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 Y_RNA.414-201ENST00000384011 101 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 RNU6-378P-201ENST00000384324 107 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
LINC00477Q96M19 AL079342.1-201ENST00000401460 267 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 Y_RNA.597-201ENST00000410463 100 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 RN7SKP223-201ENST00000410582 62 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 AL590135.1-201ENST00000422215 156 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 EIF4EP2-201ENST00000422816 654 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 AC019205.3-201ENST00000424573 156 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.38□□□□□ -2.19
LINC00477Q96M19 Z82205.1-201ENST00000428456 297 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 AC244670.1-201ENST00000436879 112 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 AC016700.2-201ENST00000446011 156 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 FTH1P25-201ENST00000447665 469 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 FGF7P6-202ENST00000451282 293 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 RPL9P9-202ENST00000466501 579 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 AF186996.7-201ENST00000492781 209 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.38□□□□□ -2.19
LINC00477Q96M19 AC015911.1-201ENST00000495111 156 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 AC021146.2-201ENST00000504736 556 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 AC010486.1-201ENST00000511793 424 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.38□□□□□ -2.19
LINC00477Q96M19 AC109329.1-201ENST00000518744 317 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.38□□□□□ -2.19
LINC00477Q96M19 AC087854.1-201ENST00000519706 414 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.38□□□□□ -2.19
LINC00477Q96M19 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.38□□□□□ -2.19
LINC00477Q96M19 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.38□□□□□ -2.19
LINC00477Q96M19 HSPE1P4-201ENST00000550617 308 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.38□□□□□ -2.19
LINC00477Q96M19 MIR3618-201ENST00000580330 88 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 AP003465.2-201ENST00000602571 373 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 AL034555.1-201ENST00000604816 211 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.38□□□□□ -2.19
LINC00477Q96M19 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 AC002543.1-201ENST00000299783 1954 ntBASIC1.38□□□□□ -2.19
LINC00477Q96M19 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
LINC00477Q96M19 Y_RNA.184-201ENST00000363884 108 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
LINC00477Q96M19 Y_RNA.504-201ENST00000384481 104 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 SNORA12.2-201ENST00000391040 156 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 RNU2-2P-201ENST00000410396 191 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 RN7SKP192-201ENST00000411291 327 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 AC004866.1-201ENST00000411748 78 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 AP000275.1-201ENST00000411943 390 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
LINC00477Q96M19 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.37□□□□□ -2.19
LINC00477Q96M19 NDUFA5P4-201ENST00000436704 385 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 Z82188.1-201ENST00000436709 154 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 RBMX2P4-201ENST00000441256 376 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.37□□□□□ -2.19
LINC00477Q96M19 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.37□□□□□ -2.19
LINC00477Q96M19 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.37□□□□□ -2.19
LINC00477Q96M19 AC012308.1-201ENST00000451232 178 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 AC145146.1-201ENST00000496370 254 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 ATP5EP1-201ENST00000510257 156 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 RNA5SP182-201ENST00000516064 82 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 RNU6-864P-201ENST00000516256 108 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 RNU6-667P-201ENST00000517186 102 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 RNU6-586P-201ENST00000517265 104 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms