Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNU6-1203P-201ENST00000410703 110 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 RNU2-64P-201ENST00000411315 191 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 SDAD1P3-201ENST00000427380 333 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 AL590664.1-201ENST00000448065 339 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 TRBVB-201ENST00000477100 408 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 AC006483.1-201ENST00000487308 313 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 RPL23AP75-201ENST00000491601 451 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 ANXA2P1-201ENST00000505539 926 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 SNORA31.1-201ENST00000515993 133 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 SNORA31.5-201ENST00000516190 133 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 SNORD59.2-201ENST00000516873 68 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 AL451007.1-201ENST00000595491 289 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 AL109918.3-201ENST00000603072 338 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 RPL23AP88-201ENST00000605759 454 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 AC141273.2-201ENST00000618989 130 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 SCARNA4-201ENST00000629045 128 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 SNORA43.4-201ENST00000629559 138 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 AC009487.2-201ENST00000420969 6821 ntBASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
ZNF549Q6P9A3 RNU6-884P-201ENST00000363889 107 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 RNU6-17P-201ENST00000384245 107 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 Y_RNA.477-201ENST00000384352 108 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 RNU6-18P-201ENST00000384527 107 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 Y_RNA.552-201ENST00000384665 112 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 BTF3L4P2-201ENST00000392798 346 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 MIR888-201ENST00000401186 77 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 AL031121.1-201ENST00000406553 254 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 RNU2-25P-201ENST00000411041 191 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 RPL23AP95-201ENST00000426806 265 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 AC007969.2-201ENST00000441891 191 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 MTND4LP30-201ENST00000454092 297 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 TOMM22P6-201ENST00000465035 409 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 RPL39P38-201ENST00000467018 153 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 RN7SL499P-201ENST00000481141 276 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 RPL30P14-201ENST00000482744 348 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 AF186996.7-201ENST00000492781 209 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 RPS27AP10-201ENST00000496103 208 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 RNU7-175P-201ENST00000515915 61 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 AC020895.1-201ENST00000595362 272 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 AL138880.2-201ENST00000616214 239 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 AC110774.1-201ENST00000623567 2018 ntBASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.67□□□□□ -1.98
ZNF549Q6P9A3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 RNU6-222P-201ENST00000362438 107 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 RNU6-1301P-201ENST00000362724 104 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 U3.13-201ENST00000364804 214 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 RNU4-9P-201ENST00000364951 139 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 RNU6-1286P-201ENST00000383871 107 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 Y_RNA.539-201ENST00000384635 107 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 MIR592-201ENST00000384959 97 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 MIR887-201ENST00000401258 79 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 RNA5SP38-201ENST00000410750 119 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 RNA5SP21-201ENST00000410917 96 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 HMGN2P30-201ENST00000423237 256 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 AC087499.2-201ENST00000432861 149 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 RPL39P40-201ENST00000445481 146 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 snoU13.30-201ENST00000458951 104 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 RPS29P20-201ENST00000489592 171 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 Y_RNA.673-201ENST00000516306 88 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 RNU6-1012P-201ENST00000516606 109 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 Y_RNA.706-201ENST00000516933 99 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 CR383656.8-201ENST00000549046 145 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 MIR4300-201ENST00000581016 96 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 AC010900.2-201ENST00000604508 210 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 AC009541.1-201ENST00000438279 2662 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 MTND5P6-201ENST00000422338 1798 ntBASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
ZNF549Q6P9A3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
ZNF549Q6P9A3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.98
ZNF549Q6P9A3 AC233981.2-201ENST00000611524 1614 ntBASIC2.65□□□□□ -1.98
ZNF549Q6P9A3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 RNU6-527P-201ENST00000363425 104 ntBASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 MIR634-201ENST00000385208 97 ntBASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 RNU1-101P-201ENST00000391171 127 ntBASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 FTH1P15-201ENST00000406984 280 ntBASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 AC009296.1-201ENST00000443146 155 ntBASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 RNU7-87P-201ENST00000459343 62 ntBASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 RPL23AP49-201ENST00000492925 468 ntBASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 RN7SKP132-201ENST00000516001 208 ntBASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 RNU6-928P-201ENST00000516876 104 ntBASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 RNU6-111P-201ENST00000517179 105 ntBASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 AC010186.2-204ENST00000537668 439 ntBASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 AC090617.3-201ENST00000573670 475 ntBASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 AC073410.2-201ENST00000603240 332 ntBASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 AL355877.2-201ENST00000603670 358 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms