Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 RPL12P50-201ENST00000603116 116 ntBASIC2.56□□□□□ -2
RUNDC3AQ59EK9 RMST_6.1-201ENST00000611980 203 ntBASIC2.56□□□□□ -2
RUNDC3AQ59EK9 AC022140.2-201ENST00000623500 188 ntBASIC2.56□□□□□ -2
RUNDC3AQ59EK9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.56□□□□□ -2
RUNDC3AQ59EK9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
RUNDC3AQ59EK9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
RUNDC3AQ59EK9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RUNDC3AQ59EK9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RUNDC3AQ59EK9 RNU1-23P-201ENST00000363361 144 ntBASIC2.55□□□□□ -2
RUNDC3AQ59EK9 SNORD32B-201ENST00000364460 84 ntBASIC2.55□□□□□ -2
RUNDC3AQ59EK9 RNU6-99P-201ENST00000364721 107 ntBASIC2.55□□□□□ -2
RUNDC3AQ59EK9 RNU6-17P-201ENST00000384245 107 ntBASIC2.55□□□□□ -2
RUNDC3AQ59EK9 Y_RNA.463-201ENST00000384271 102 ntBASIC2.55□□□□□ -2
RUNDC3AQ59EK9 RNU6-18P-201ENST00000384527 107 ntBASIC2.55□□□□□ -2
RUNDC3AQ59EK9 MIR483-201ENST00000385070 76 ntBASIC2.55□□□□□ -2
RUNDC3AQ59EK9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.55□□□□□ -2
RUNDC3AQ59EK9 Y_RNA.597-201ENST00000410463 100 ntBASIC2.55□□□□□ -2
RUNDC3AQ59EK9 RNU2-25P-201ENST00000411041 191 ntBASIC2.55□□□□□ -2
RUNDC3AQ59EK9 MRPS18CP6-201ENST00000423587 223 ntBASIC2.55□□□□□ -2
RUNDC3AQ59EK9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.55□□□□□ -2
RUNDC3AQ59EK9 SNORA48.11-201ENST00000517015 89 ntBASIC2.55□□□□□ -2
RUNDC3AQ59EK9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.55□□□□□ -2
RUNDC3AQ59EK9 AC004584.2-201ENST00000570407 410 ntBASIC2.55□□□□□ -2
RUNDC3AQ59EK9 MIR4446-201ENST00000578505 67 ntBASIC2.55□□□□□ -2
RUNDC3AQ59EK9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.55□□□□□ -2
RUNDC3AQ59EK9 AL080274.1-201ENST00000605565 220 ntBASIC2.55□□□□□ -2
RUNDC3AQ59EK9 AL355802.3-201ENST00000607571 545 ntBASIC2.55□□□□□ -2
RUNDC3AQ59EK9 AC008121.3-201ENST00000618726 433 ntBASIC2.55□□□□□ -2
RUNDC3AQ59EK9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.55□□□□□ -2
RUNDC3AQ59EK9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RUNDC3AQ59EK9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RUNDC3AQ59EK9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.54□□□□□ -2
RUNDC3AQ59EK9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.54□□□□□ -2
RUNDC3AQ59EK9 MIR369-201ENST00000362155 70 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 RNU6-1072P-201ENST00000384703 107 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 RNU6-443P-201ENST00000384780 107 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 RNU6-1093P-201ENST00000391194 107 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 RNU2-63P-201ENST00000410792 194 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 AL590556.1-201ENST00000423231 483 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.54□□□□□ -2
RUNDC3AQ59EK9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.54□□□□□ -2
RUNDC3AQ59EK9 UBE2V1P7-201ENST00000446395 340 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.54□□□□□ -2
RUNDC3AQ59EK9 CYP2C59P-201ENST00000457790 269 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 Y_RNA.639-201ENST00000458981 102 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 RPS29P26-201ENST00000477483 171 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.54□□□□□ -2
RUNDC3AQ59EK9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.54□□□□□ -2
RUNDC3AQ59EK9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.54□□□□□ -2
RUNDC3AQ59EK9 RNU7-175P-201ENST00000515915 61 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 RNU6-1170P-201ENST00000515974 106 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 RNU6-264P-201ENST00000517134 104 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 EIF4A1P12-201ENST00000551910 141 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 AC027288.2-201ENST00000553028 243 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 AL049779.4-201ENST00000604500 156 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 AC137590.2-201ENST00000619709 240 ntBASIC2.54□□□□□ -2
RUNDC3AQ59EK9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RUNDC3AQ59EK9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.53□□□□□ -2
RUNDC3AQ59EK9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.53□□□□□ -2
RUNDC3AQ59EK9 RNU6-490P-201ENST00000362985 107 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 U3.9-201ENST00000363823 204 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 SNORA25.6-201ENST00000364121 118 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 RNU1-138P-201ENST00000384093 164 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 MIR153-2-201ENST00000385225 87 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 MIR549A-201ENST00000385268 96 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 RNU6-700P-201ENST00000391043 107 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 MTCYBP10-201ENST00000424905 650 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.53□□□□□ -2
RUNDC3AQ59EK9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.53□□□□□ -2
RUNDC3AQ59EK9 CKS1BP2-201ENST00000497342 240 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 AC105758.1-201ENST00000506038 399 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.53□□□□□ -2
RUNDC3AQ59EK9 RNU6-699P-201ENST00000517081 110 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.53□□□□□ -2
RUNDC3AQ59EK9 AC018630.3-201ENST00000542637 96 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 7SK.7-201ENST00000603504 247 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 AC016727.2-201ENST00000603988 621 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 AC005000.2-201ENST00000605468 310 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 AC100812.1-201ENST00000607622 580 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 MIR1244-1-201ENST00000612829 85 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 MIR1244-3-201ENST00000635744 85 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 FO624990.1-201ENST00000636373 85 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 MIR1244-2-201ENST00000636449 85 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 MIR1244-4-202ENST00000636813 85 ntBASIC2.53□□□□□ -2
RUNDC3AQ59EK9 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
RUNDC3AQ59EK9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RUNDC3AQ59EK9 Y_RNA.5-201ENST00000362334 102 ntBASIC2.52□□□□□ -2.01
RUNDC3AQ59EK9 RNU6-1159P-201ENST00000362933 107 ntBASIC2.52□□□□□ -2.01
RUNDC3AQ59EK9 Y_RNA.138-201ENST00000363462 102 ntBASIC2.52□□□□□ -2.01
RUNDC3AQ59EK9 Y_RNA.197-201ENST00000364004 102 ntBASIC2.52□□□□□ -2.01
RUNDC3AQ59EK9 RNU6-694P-201ENST00000364071 147 ntBASIC2.52□□□□□ -2.01
RUNDC3AQ59EK9 RNA5SP240-201ENST00000365355 128 ntBASIC2.52□□□□□ -2.01
RUNDC3AQ59EK9 Y_RNA.395-201ENST00000383945 109 ntBASIC2.52□□□□□ -2.01
RUNDC3AQ59EK9 Y_RNA.577-201ENST00000384794 101 ntBASIC2.52□□□□□ -2.01
RUNDC3AQ59EK9 MIR190B-201ENST00000401119 79 ntBASIC2.52□□□□□ -2.01
RUNDC3AQ59EK9 EEF1A1P41-201ENST00000414667 207 ntBASIC2.52□□□□□ -2.01
RUNDC3AQ59EK9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RUNDC3AQ59EK9 AC092423.1-201ENST00000430165 186 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 470.7 ms