Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC012414.2-201ENST00000559474 187 ntBASIC-0.22□□□□□ -2.44
UBA52P62987 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.22□□□□□ -2.44
UBA52P62987 AL353778.1-201ENST00000603149 408 ntBASIC-0.22□□□□□ -2.44
UBA52P62987 AL390123.1-201ENST00000603216 237 ntBASIC-0.22□□□□□ -2.44
UBA52P62987 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.22□□□□□ -2.44
UBA52P62987 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.22□□□□□ -2.44
UBA52P62987 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.23□□□□□ -2.45
UBA52P62987 RNU4-15P-201ENST00000362613 141 ntBASIC-0.23□□□□□ -2.45
UBA52P62987 RNA5SP214-201ENST00000363378 118 ntBASIC-0.23□□□□□ -2.45
UBA52P62987 SNORA33-201ENST00000363664 130 ntBASIC-0.23□□□□□ -2.45
UBA52P62987 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.23□□□□□ -2.45
UBA52P62987 RNU6-952P-201ENST00000391164 108 ntBASIC-0.23□□□□□ -2.45
UBA52P62987 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.23□□□□□ -2.45
UBA52P62987 AL079342.2-201ENST00000403367 482 ntBASIC-0.23□□□□□ -2.45
UBA52P62987 AL034345.1-201ENST00000407768 123 ntBASIC-0.23□□□□□ -2.45
UBA52P62987 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.23□□□□□ -2.45
UBA52P62987 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.23□□□□□ -2.45
UBA52P62987 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.23□□□□□ -2.45
UBA52P62987 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.23□□□□□ -2.45
UBA52P62987 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.23□□□□□ -2.45
UBA52P62987 AC003071.1-201ENST00000451219 789 ntBASIC-0.23□□□□□ -2.45
UBA52P62987 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.23□□□□□ -2.45
UBA52P62987 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.23□□□□□ -2.45
UBA52P62987 ART2BP-201ENST00000453501 499 ntBASIC-0.23□□□□□ -2.45
UBA52P62987 snoU13.25-201ENST00000458945 104 ntBASIC-0.23□□□□□ -2.45
UBA52P62987 MIR4645-201ENST00000583158 77 ntBASIC-0.23□□□□□ -2.45
UBA52P62987 AC091135.1-201ENST00000585943 307 ntBASIC-0.23□□□□□ -2.45
UBA52P62987 uc_338.22-201ENST00000622722 187 ntBASIC-0.23□□□□□ -2.45
UBA52P62987 AC106754.2-201ENST00000623006 233 ntBASIC-0.23□□□□□ -2.45
UBA52P62987 AL157786.1-207ENST00000627771 695 ntBASIC-0.23□□□□□ -2.45
UBA52P62987 RNU4-73P-201ENST00000363164 141 ntBASIC-0.24□□□□□ -2.45
UBA52P62987 RNU6-877P-201ENST00000383868 107 ntBASIC-0.24□□□□□ -2.45
UBA52P62987 RNU6-72P-201ENST00000384285 79 ntBASIC-0.24□□□□□ -2.45
UBA52P62987 SNORD116-20-201ENST00000384529 92 ntBASIC-0.24□□□□□ -2.45
UBA52P62987 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.24□□□□□ -2.45
UBA52P62987 FCF1P10-201ENST00000407590 479 ntBASIC-0.24□□□□□ -2.45
UBA52P62987 MTCYBP10-201ENST00000424905 650 ntBASIC-0.24□□□□□ -2.45
UBA52P62987 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.24□□□□□ -2.45
UBA52P62987 SCARNA1-201ENST00000517138 166 ntBASIC-0.24□□□□□ -2.45
UBA52P62987 AC027419.1-201ENST00000522976 328 ntBASIC-0.24□□□□□ -2.45
UBA52P62987 AC016256.1-201ENST00000547971 354 ntBASIC-0.24□□□□□ -2.45
UBA52P62987 AC131055.1-201ENST00000584626 316 ntBASIC-0.24□□□□□ -2.45
UBA52P62987 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.24□□□□□ -2.45
UBA52P62987 BNIP3P9-201ENST00000603714 553 ntBASIC-0.24□□□□□ -2.45
UBA52P62987 AL136363.2-201ENST00000604173 851 ntBASIC-0.24□□□□□ -2.45
UBA52P62987 AC018889.1-201ENST00000605372 397 ntBASIC-0.24□□□□□ -2.45
UBA52P62987 AC136475.10-201ENST00000620253 385 ntBASIC-0.24□□□□□ -2.45
UBA52P62987 AC120349.2-201ENST00000625002 298 ntBASIC-0.24□□□□□ -2.45
UBA52P62987 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.25□□□□□ -2.45
UBA52P62987 RNU6-833P-201ENST00000363486 107 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 MIR520F-201ENST00000384824 87 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 MIR604-201ENST00000384880 94 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 SNORA12.1-201ENST00000390873 148 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.25□□□□□ -2.45
UBA52P62987 AC002486.1-201ENST00000435098 391 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.25□□□□□ -2.45
UBA52P62987 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.25□□□□□ -2.45
UBA52P62987 AC245047.8-201ENST00000456455 284 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 AL122001.1-201ENST00000457027 370 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 AC022364.2-201ENST00000457963 554 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 AC016925.1-201ENST00000458303 298 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 RNU7-136P-201ENST00000458819 69 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.25□□□□□ -2.45
UBA52P62987 HMGB1P29-201ENST00000505659 499 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 MTND2P33-201ENST00000506452 1031 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.25□□□□□ -2.45
UBA52P62987 RNU6-947P-201ENST00000516264 106 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 SNORA31.10-201ENST00000516482 106 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 AC022523.2-201ENST00000561045 150 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 uc_338.6-201ENST00000613544 171 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 AC006001.4-201ENST00000622243 395 ntBASIC-0.25□□□□□ -2.45
UBA52P62987 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
UBA52P62987 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.26□□□□□ -2.45
UBA52P62987 RNA5SP368-201ENST00000364298 116 ntBASIC-0.26□□□□□ -2.45
UBA52P62987 RNU4-48P-201ENST00000365559 182 ntBASIC-0.26□□□□□ -2.45
UBA52P62987 RNU6-793P-201ENST00000384233 104 ntBASIC-0.26□□□□□ -2.45
UBA52P62987 RNU6-932P-201ENST00000391108 106 ntBASIC-0.26□□□□□ -2.45
UBA52P62987 RNA5SP496-201ENST00000391240 109 ntBASIC-0.26□□□□□ -2.45
UBA52P62987 AC104332.1-201ENST00000440471 797 ntBASIC-0.26□□□□□ -2.45
UBA52P62987 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.26□□□□□ -2.45
UBA52P62987 RNU6-856P-201ENST00000516959 98 ntBASIC-0.26□□□□□ -2.45
UBA52P62987 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.26□□□□□ -2.45
UBA52P62987 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.26□□□□□ -2.45
UBA52P62987 ZNF971P-201ENST00000562068 1249 ntBASIC-0.26□□□□□ -2.45
UBA52P62987 MIR4293-201ENST00000584305 78 ntBASIC-0.26□□□□□ -2.45
UBA52P62987 RNU4-5P-201ENST00000607255 135 ntBASIC-0.26□□□□□ -2.45
UBA52P62987 MIR1264-201ENST00000616374 69 ntBASIC-0.26□□□□□ -2.45
UBA52P62987 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.27□□□□□ -2.45
UBA52P62987 RNY4P3-201ENST00000365254 95 ntBASIC-0.27□□□□□ -2.45
UBA52P62987 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.27□□□□□ -2.45
UBA52P62987 AL603865.2-201ENST00000401679 213 ntBASIC-0.27□□□□□ -2.45
UBA52P62987 RNA5SP504-201ENST00000410676 117 ntBASIC-0.27□□□□□ -2.45
UBA52P62987 AC027644.1-201ENST00000419595 298 ntBASIC-0.27□□□□□ -2.45
UBA52P62987 AC060773.1-201ENST00000421698 310 ntBASIC-0.27□□□□□ -2.45
UBA52P62987 AL365338.1-201ENST00000422282 858 ntBASIC-0.27□□□□□ -2.45
UBA52P62987 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.27□□□□□ -2.45
UBA52P62987 HMGN2P22-201ENST00000427588 175 ntBASIC-0.27□□□□□ -2.45
UBA52P62987 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms