Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RNU7-187P-201ENST00000458985 68 ntBASIC2.01□□□□□ -2.09
PEX3P56589 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.01□□□□□ -2.09
PEX3P56589 HMGB1P35-201ENST00000503360 598 ntBASIC2.01□□□□□ -2.09
PEX3P56589 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.01□□□□□ -2.09
PEX3P56589 AC107393.1-201ENST00000512403 346 ntBASIC2.01□□□□□ -2.09
PEX3P56589 AC025465.4-201ENST00000513422 638 ntBASIC2.01□□□□□ -2.09
PEX3P56589 RNU6-1088P-201ENST00000516850 104 ntBASIC2.01□□□□□ -2.09
PEX3P56589 AC115990.1-201ENST00000526957 301 ntBASIC2.01□□□□□ -2.09
PEX3P56589 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
PEX3P56589 AC018630.3-201ENST00000542637 96 ntBASIC2.01□□□□□ -2.09
PEX3P56589 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.01□□□□□ -2.09
PEX3P56589 AC011494.1-201ENST00000596454 237 ntBASIC2.01□□□□□ -2.09
PEX3P56589 AL078605.1-201ENST00000603529 500 ntBASIC2.01□□□□□ -2.09
PEX3P56589 MIR5739-201ENST00000619803 80 ntBASIC2.01□□□□□ -2.09
PEX3P56589 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PEX3P56589 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PEX3P56589 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
PEX3P56589 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
PEX3P56589 Y_RNA.301-201ENST00000364990 103 ntBASIC2□□□□□ -2.09
PEX3P56589 RNU2-40P-201ENST00000410833 196 ntBASIC2□□□□□ -2.09
PEX3P56589 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2□□□□□ -2.09
PEX3P56589 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2□□□□□ -2.09
PEX3P56589 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2□□□□□ -2.09
PEX3P56589 AC078809.1-201ENST00000427601 140 ntBASIC2□□□□□ -2.09
PEX3P56589 RPL23AP42-201ENST00000471152 471 ntBASIC2□□□□□ -2.09
PEX3P56589 AC022447.4-201ENST00000504053 364 ntBASIC2□□□□□ -2.09
PEX3P56589 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2□□□□□ -2.09
PEX3P56589 SNORA31.16-201ENST00000516773 139 ntBASIC2□□□□□ -2.09
PEX3P56589 AP005902.1-201ENST00000521358 186 ntBASIC2□□□□□ -2.09
PEX3P56589 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2□□□□□ -2.09
PEX3P56589 AC026371.1-201ENST00000551867 419 ntBASIC2□□□□□ -2.09
PEX3P56589 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
PEX3P56589 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2□□□□□ -2.09
PEX3P56589 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2□□□□□ -2.09
PEX3P56589 RNU4-15P-201ENST00000362613 141 ntBASIC1.99□□□□□ -2.09
PEX3P56589 RNU6-227P-201ENST00000362865 103 ntBASIC1.99□□□□□ -2.09
PEX3P56589 Y_RNA.279-201ENST00000364763 95 ntBASIC1.99□□□□□ -2.09
PEX3P56589 SNORD116-11-201ENST00000383882 92 ntBASIC1.99□□□□□ -2.09
PEX3P56589 RNU1-148P-201ENST00000384472 162 ntBASIC1.99□□□□□ -2.09
PEX3P56589 MIR504-201ENST00000385065 83 ntBASIC1.99□□□□□ -2.09
PEX3P56589 SNORA46.1-201ENST00000391069 153 ntBASIC1.99□□□□□ -2.09
PEX3P56589 RNA5SP201-201ENST00000410316 124 ntBASIC1.99□□□□□ -2.09
PEX3P56589 AC009161.1-201ENST00000417306 376 ntBASIC1.99□□□□□ -2.09
PEX3P56589 AC244670.1-201ENST00000436879 112 ntBASIC1.99□□□□□ -2.09
PEX3P56589 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.99□□□□□ -2.09
PEX3P56589 RNU6-329P-201ENST00000459618 107 ntBASIC1.99□□□□□ -2.09
PEX3P56589 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.99□□□□□ -2.09
PEX3P56589 MTCO1P29-201ENST00000496868 288 ntBASIC1.99□□□□□ -2.09
PEX3P56589 AC096745.1-201ENST00000509945 370 ntBASIC1.99□□□□□ -2.09
PEX3P56589 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.99□□□□□ -2.09
PEX3P56589 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.99□□□□□ -2.09
PEX3P56589 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.99□□□□□ -2.09
PEX3P56589 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.99□□□□□ -2.09
PEX3P56589 AC078795.3-201ENST00000602913 472 ntBASIC1.99□□□□□ -2.09
PEX3P56589 AL034555.1-201ENST00000604816 211 ntBASIC1.99□□□□□ -2.09
PEX3P56589 BNIP3P10-201ENST00000605360 577 ntBASIC1.99□□□□□ -2.09
PEX3P56589 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.99□□□□□ -2.09
PEX3P56589 AC009248.2-201ENST00000619826 254 ntBASIC1.99□□□□□ -2.09
PEX3P56589 AC098657.3-201ENST00000620434 263 ntBASIC1.99□□□□□ -2.09
PEX3P56589 AC009033.1-201ENST00000624279 431 ntBASIC1.99□□□□□ -2.09
PEX3P56589 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.99□□□□□ -2.09
PEX3P56589 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.98□□□□□ -2.09
PEX3P56589 AC092268.1-201ENST00000342691 405 ntBASIC1.98□□□□□ -2.09
PEX3P56589 Y_RNA.72-201ENST00000362894 103 ntBASIC1.98□□□□□ -2.09
PEX3P56589 RNU6-944P-201ENST00000364023 107 ntBASIC1.98□□□□□ -2.09
PEX3P56589 U3.13-201ENST00000364804 214 ntBASIC1.98□□□□□ -2.09
PEX3P56589 RNA5SP240-201ENST00000365355 128 ntBASIC1.98□□□□□ -2.09
PEX3P56589 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PEX3P56589 MIR1294-201ENST00000408503 142 ntBASIC1.98□□□□□ -2.09
PEX3P56589 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.98□□□□□ -2.09
PEX3P56589 AC124916.1-201ENST00000444020 547 ntBASIC1.98□□□□□ -2.09
PEX3P56589 MTND1P17-201ENST00000448961 204 ntBASIC1.98□□□□□ -2.09
PEX3P56589 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.98□□□□□ -2.09
PEX3P56589 CYP2C59P-201ENST00000457790 269 ntBASIC1.98□□□□□ -2.09
PEX3P56589 RPL9P9-202ENST00000466501 579 ntBASIC1.98□□□□□ -2.09
PEX3P56589 AC068781.1-201ENST00000488231 618 ntBASIC1.98□□□□□ -2.09
PEX3P56589 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.98□□□□□ -2.09
PEX3P56589 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.98□□□□□ -2.09
PEX3P56589 RNU4-49P-201ENST00000516080 140 ntBASIC1.98□□□□□ -2.09
PEX3P56589 RNU6-586P-201ENST00000517265 104 ntBASIC1.98□□□□□ -2.09
PEX3P56589 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.98□□□□□ -2.09
PEX3P56589 HSPE1P4-201ENST00000550617 308 ntBASIC1.98□□□□□ -2.09
PEX3P56589 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.98□□□□□ -2.09
PEX3P56589 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.98□□□□□ -2.09
PEX3P56589 MIR4742-201ENST00000581069 85 ntBASIC1.98□□□□□ -2.09
PEX3P56589 MIR3136-201ENST00000583498 78 ntBASIC1.98□□□□□ -2.09
PEX3P56589 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.98□□□□□ -2.09
PEX3P56589 SNORD14A-201ENST00000606526 91 ntBASIC1.98□□□□□ -2.09
PEX3P56589 SNORD98-201ENST00000636377 67 ntBASIC1.98□□□□□ -2.09
PEX3P56589 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.98□□□□□ -2.09
PEX3P56589 snoU2_19.1-201ENST00000362361 80 ntBASIC1.97□□□□□ -2.09
PEX3P56589 RNU6-562P-201ENST00000362731 107 ntBASIC1.97□□□□□ -2.09
PEX3P56589 Y_RNA.390-201ENST00000383932 102 ntBASIC1.97□□□□□ -2.09
PEX3P56589 RNU6-142P-201ENST00000384019 107 ntBASIC1.97□□□□□ -2.09
PEX3P56589 RNU6-1106P-201ENST00000390845 107 ntBASIC1.97□□□□□ -2.09
PEX3P56589 SNORA26.9-201ENST00000391322 122 ntBASIC1.97□□□□□ -2.09
PEX3P56589 SUMO2P12-201ENST00000405924 140 ntBASIC1.97□□□□□ -2.09
PEX3P56589 MTCYBP2-201ENST00000407745 171 ntBASIC1.97□□□□□ -2.09
PEX3P56589 SNORD23.1-201ENST00000408212 104 ntBASIC1.97□□□□□ -2.09
PEX3P56589 RNU2-63P-201ENST00000410792 194 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms