Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SNORA33-201ENST00000363664 130 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 RNU6-716P-201ENST00000365621 103 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 SNORA12.1-201ENST00000390873 148 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 VPS26BP1-201ENST00000417155 755 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 RPL37P21-201ENST00000435890 276 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 MTND2P20-201ENST00000440805 661 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 MTND4LP16-201ENST00000440828 295 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 AC079776.3-201ENST00000450665 370 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 AL583843.1-201ENST00000456070 346 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 AL122001.1-201ENST00000457027 370 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 AC104136.1-201ENST00000512969 394 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 AC116347.2-201ENST00000514912 523 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.37□□□□□ -2.47
SNCAP37840 MIR1273C-201ENST00000578669 77 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 MIR4305-201ENST00000583252 102 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 AC092634.7-201ENST00000621022 103 ntBASIC-0.37□□□□□ -2.47
SNCAP37840 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.37□□□□□ -2.47
SNCAP37840 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
SNCAP37840 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.38□□□□□ -2.47
SNCAP37840 SNORD114-26-201ENST00000363543 72 ntBASIC-0.38□□□□□ -2.47
SNCAP37840 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.38□□□□□ -2.47
SNCAP37840 SNORA75B-201ENST00000384053 137 ntBASIC-0.38□□□□□ -2.47
SNCAP37840 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.38□□□□□ -2.47
SNCAP37840 SNORD105-201ENST00000386910 85 ntBASIC-0.38□□□□□ -2.47
SNCAP37840 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.38□□□□□ -2.47
SNCAP37840 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.38□□□□□ -2.47
SNCAP37840 AC010154.1-201ENST00000425857 269 ntBASIC-0.38□□□□□ -2.47
SNCAP37840 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC-0.38□□□□□ -2.47
SNCAP37840 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.38□□□□□ -2.47
SNCAP37840 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.38□□□□□ -2.47
SNCAP37840 AC023157.2-201ENST00000540596 141 ntBASIC-0.38□□□□□ -2.47
SNCAP37840 AC021231.3-201ENST00000558497 370 ntBASIC-0.38□□□□□ -2.47
SNCAP37840 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.38□□□□□ -2.47
SNCAP37840 AL603839.4-201ENST00000624658 1005 ntBASIC-0.38□□□□□ -2.47
SNCAP37840 RNA5SP517-201ENST00000364724 117 ntBASIC-0.39□□□□□ -2.47
SNCAP37840 AL451046.2-201ENST00000403074 277 ntBASIC-0.39□□□□□ -2.47
SNCAP37840 MTCO2P34-201ENST00000421994 607 ntBASIC-0.39□□□□□ -2.47
SNCAP37840 SEPT7P5-201ENST00000434048 306 ntBASIC-0.39□□□□□ -2.47
SNCAP37840 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.39□□□□□ -2.47
SNCAP37840 SEPT7P4-201ENST00000437076 306 ntBASIC-0.39□□□□□ -2.47
SNCAP37840 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.39□□□□□ -2.47
SNCAP37840 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.39□□□□□ -2.47
SNCAP37840 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.39□□□□□ -2.47
SNCAP37840 MIR4293-201ENST00000584305 78 ntBASIC-0.39□□□□□ -2.47
SNCAP37840 SCARNA4-202ENST00000625402 129 ntBASIC-0.39□□□□□ -2.47
SNCAP37840 MIR18A-201ENST00000362310 71 ntBASIC-0.4□□□□□ -2.47
SNCAP37840 SNORA4.3-201ENST00000365564 137 ntBASIC-0.4□□□□□ -2.47
SNCAP37840 RNA5SP109-201ENST00000391010 116 ntBASIC-0.4□□□□□ -2.47
SNCAP37840 AL079342.2-201ENST00000403367 482 ntBASIC-0.4□□□□□ -2.47
SNCAP37840 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.4□□□□□ -2.47
SNCAP37840 MTND4P25-201ENST00000441039 533 ntBASIC-0.4□□□□□ -2.47
SNCAP37840 AL606517.2-201ENST00000442855 241 ntBASIC-0.4□□□□□ -2.47
SNCAP37840 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.4□□□□□ -2.47
SNCAP37840 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.4□□□□□ -2.47
SNCAP37840 AP002001.1-203ENST00000534002 267 ntBASIC-0.4□□□□□ -2.47
SNCAP37840 AC112693.2-201ENST00000556538 232 ntBASIC-0.4□□□□□ -2.47
SNCAP37840 ZNF971P-201ENST00000562068 1249 ntBASIC-0.4□□□□□ -2.47
SNCAP37840 AL034555.1-201ENST00000604816 211 ntBASIC-0.4□□□□□ -2.47
SNCAP37840 AP000676.3-201ENST00000623299 569 ntBASIC-0.4□□□□□ -2.47
SNCAP37840 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.41□□□□□ -2.47
SNCAP37840 U8.7-201ENST00000364940 136 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 RNU6-395P-201ENST00000365662 106 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 MIR660-201ENST00000385235 97 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 MIR613-201ENST00000385248 95 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 SNORA40.8-201ENST00000411034 126 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 AC027644.1-201ENST00000419595 298 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.41□□□□□ -2.48
SNCAP37840 AC006026.2-201ENST00000457376 180 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 AC104563.1-201ENST00000476147 376 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 OR9P1P-201ENST00000496431 281 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 AC022447.4-201ENST00000504053 364 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 RBBP4P6-201ENST00000508098 202 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
SNCAP37840 SNORA25.12-201ENST00000516202 82 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 RNU6-917P-201ENST00000516294 104 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 SNORA43.2-201ENST00000516652 128 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 AC022868.1-201ENST00000517767 391 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 MTND1P36-201ENST00000522384 936 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 AC115990.1-201ENST00000526957 301 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.41□□□□□ -2.48
SNCAP37840 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.41□□□□□ -2.48
SNCAP37840 AC064807.4-201ENST00000607201 407 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 AC004832.4-201ENST00000608952 331 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 AL096861.1-201ENST00000610899 123 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 AL354696.1-201ENST00000614652 497 ntBASIC-0.41□□□□□ -2.48
SNCAP37840 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.41□□□□□ -2.48
SNCAP37840 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.42□□□□□ -2.48
SNCAP37840 RNA5SP128-201ENST00000365305 116 ntBASIC-0.42□□□□□ -2.48
SNCAP37840 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.42□□□□□ -2.48
SNCAP37840 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.42□□□□□ -2.48
SNCAP37840 MTATP6P16-201ENST00000434543 526 ntBASIC-0.42□□□□□ -2.48
SNCAP37840 AC007969.2-201ENST00000441891 191 ntBASIC-0.42□□□□□ -2.48
SNCAP37840 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.42□□□□□ -2.48
SNCAP37840 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.42□□□□□ -2.48
SNCAP37840 AL133217.1-201ENST00000450980 425 ntBASIC-0.42□□□□□ -2.48
SNCAP37840 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms