Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 CTHRC1P1-201ENST00000605383 469 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.36□□□□□ -2.19
COL5A1P20908 AC093913.1-201ENST00000614178 329 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 AC009233.1-201ENST00000616477 371 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 AL359314.1-201ENST00000616913 261 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COL5A1P20908 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
COL5A1P20908 Y_RNA.142-201ENST00000363491 102 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 Y_RNA.146-201ENST00000363549 102 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 SNORD114-27-201ENST00000363766 70 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 SNORD81.2-201ENST00000365153 76 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 SNORA75B-201ENST00000384053 137 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 RNU1-52P-201ENST00000384190 164 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 SNORD116-29-201ENST00000384516 83 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 MIR520E-201ENST00000384867 87 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 MIR524-201ENST00000385242 87 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
COL5A1P20908 MIR888-201ENST00000401186 77 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 AL356432.1-201ENST00000405809 419 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 AL356776.1-201ENST00000406574 447 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 RPS12P24-201ENST00000412619 387 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.36□□□□□ -2.19
COL5A1P20908 AC007560.1-201ENST00000426912 237 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 AC007919.1-201ENST00000429380 217 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 UBE2V1P7-201ENST00000446395 340 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 SNORD5.1-201ENST00000458800 75 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 AC091951.2-201ENST00000500762 203 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
COL5A1P20908 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.36□□□□□ -2.19
COL5A1P20908 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.36□□□□□ -2.19
COL5A1P20908 AC112206.3-201ENST00000514578 389 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 RNU6-123P-201ENST00000516163 102 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 RNU6-864P-201ENST00000516256 108 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 RNU6-1038P-201ENST00000516516 104 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 RNU6-914P-201ENST00000516749 109 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.36□□□□□ -2.19
COL5A1P20908 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.36□□□□□ -2.19
COL5A1P20908 CR383656.8-201ENST00000549046 145 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.36□□□□□ -2.19
COL5A1P20908 MIR4658-201ENST00000584344 65 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 C8orf59P2-201ENST00000603441 271 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 AC008121.3-201ENST00000618726 433 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 AC099654.5-201ENST00000636479 350 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
COL5A1P20908 RNU6-37P-201ENST00000362692 107 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 RNU4-79P-201ENST00000362764 141 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 RNU6-11P-201ENST00000364234 107 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 RNA5SP363-201ENST00000365072 115 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 RNU6-25P-201ENST00000383873 107 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 RNU6-48P-201ENST00000384161 107 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 RNU6-1013P-201ENST00000384180 107 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 RNU6-16P-201ENST00000384385 107 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 RNU6-15P-201ENST00000384534 107 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 Y_RNA.530-201ENST00000384587 101 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 RNU6-29P-201ENST00000384637 107 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 MIR514A2-201ENST00000385131 88 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 MIR514A3-201ENST00000385132 88 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 MT-TD-201ENST00000387419 68 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 MIR767-201ENST00000390228 109 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 SNORA16.2-201ENST00000390991 127 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 EIF4E2P1-201ENST00000393781 255 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 RNU6-1148P-201ENST00000410992 104 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 AL030996.1-201ENST00000411430 235 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.35□□□□□ -2.19
COL5A1P20908 AC074117.2-201ENST00000417130 397 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.35□□□□□ -2.19
COL5A1P20908 NCOR1P3-201ENST00000420479 303 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 NDUFB4P7-201ENST00000423198 363 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 AL669831.1-202ENST00000428504 417 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.35□□□□□ -2.19
COL5A1P20908 SNRPEP8-201ENST00000442866 260 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 AL360271.2-201ENST00000447710 161 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 NDUFB1P2-201ENST00000449477 176 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 FABP5P15-201ENST00000453566 214 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.35□□□□□ -2.19
COL5A1P20908 PMCHL2-203ENST00000457791 237 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 MTCO3P9-201ENST00000506989 781 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 CCDC34P1-201ENST00000507441 517 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 RNU6-277P-201ENST00000516272 106 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 SNORA31.19-201ENST00000517079 126 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 RNU6-1314P-201ENST00000517139 104 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 AC069113.1-201ENST00000517763 267 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.35□□□□□ -2.19
COL5A1P20908 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.35□□□□□ -2.19
COL5A1P20908 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.35□□□□□ -2.19
COL5A1P20908 AL391261.3-201ENST00000557194 520 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.35□□□□□ -2.19
COL5A1P20908 MIR4719-201ENST00000585233 84 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 UBE2V2P2-201ENST00000587677 504 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 AL158032.1-201ENST00000605401 106 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.35□□□□□ -2.19
COL5A1P20908 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COL5A1P20908 AC073544.1-201ENST00000600110 1595 ntBASIC1.35□□□□□ -2.19
COL5A1P20908 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
COL5A1P20908 AC007785.2-201ENST00000598627 1916 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 SNORD3E-201ENST00000362899 217 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 Y_RNA.160-201ENST00000363677 92 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 RNU4-20P-201ENST00000365601 151 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms