Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.56□□□□□ -2
CTPS1P17812 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.56□□□□□ -2
CTPS1P17812 Y_RNA.639-201ENST00000458981 102 ntBASIC2.56□□□□□ -2
CTPS1P17812 AC068781.1-201ENST00000488231 618 ntBASIC2.56□□□□□ -2
CTPS1P17812 RPL17P19-201ENST00000489069 552 ntBASIC2.56□□□□□ -2
CTPS1P17812 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.56□□□□□ -2
CTPS1P17812 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.56□□□□□ -2
CTPS1P17812 RNU6-470P-201ENST00000515954 104 ntBASIC2.56□□□□□ -2
CTPS1P17812 RNU6-120P-201ENST00000516077 103 ntBASIC2.56□□□□□ -2
CTPS1P17812 RNA5SP282-201ENST00000516355 108 ntBASIC2.56□□□□□ -2
CTPS1P17812 RNU6-1153P-201ENST00000516760 105 ntBASIC2.56□□□□□ -2
CTPS1P17812 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.56□□□□□ -2
CTPS1P17812 AL034555.1-201ENST00000604816 211 ntBASIC2.56□□□□□ -2
CTPS1P17812 AC010297.1-201ENST00000623948 149 ntBASIC2.56□□□□□ -2
CTPS1P17812 SCARNA4-201ENST00000629045 128 ntBASIC2.56□□□□□ -2
CTPS1P17812 AL450472.1-202ENST00000637286 180 ntBASIC2.56□□□□□ -2
CTPS1P17812 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.56□□□□□ -2
CTPS1P17812 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.56□□□□□ -2
CTPS1P17812 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CTPS1P17812 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.55□□□□□ -2
CTPS1P17812 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CTPS1P17812 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CTPS1P17812 RNU6-1115P-201ENST00000362490 106 ntBASIC2.55□□□□□ -2
CTPS1P17812 RNU6-490P-201ENST00000362985 107 ntBASIC2.55□□□□□ -2
CTPS1P17812 Y_RNA.197-201ENST00000364004 102 ntBASIC2.55□□□□□ -2
CTPS1P17812 RNU4-56P-201ENST00000364700 142 ntBASIC2.55□□□□□ -2
CTPS1P17812 RNU4-9P-201ENST00000364951 139 ntBASIC2.55□□□□□ -2
CTPS1P17812 U6atac.2-201ENST00000408644 118 ntBASIC2.55□□□□□ -2
CTPS1P17812 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.55□□□□□ -2
CTPS1P17812 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.55□□□□□ -2
CTPS1P17812 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.55□□□□□ -2
CTPS1P17812 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.55□□□□□ -2
CTPS1P17812 EEF1B2P7-201ENST00000451177 676 ntBASIC2.55□□□□□ -2
CTPS1P17812 RNU7-26P-201ENST00000458980 63 ntBASIC2.55□□□□□ -2
CTPS1P17812 RN7SKP210-201ENST00000459176 261 ntBASIC2.55□□□□□ -2
CTPS1P17812 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.55□□□□□ -2
CTPS1P17812 AF186996.7-201ENST00000492781 209 ntBASIC2.55□□□□□ -2
CTPS1P17812 HMGB1P35-201ENST00000503360 598 ntBASIC2.55□□□□□ -2
CTPS1P17812 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.55□□□□□ -2
CTPS1P17812 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
CTPS1P17812 AL590705.4-201ENST00000532209 134 ntBASIC2.55□□□□□ -2
CTPS1P17812 AC027176.1-201ENST00000560204 514 ntBASIC2.55□□□□□ -2
CTPS1P17812 AC023824.2-201ENST00000566185 400 ntBASIC2.55□□□□□ -2
CTPS1P17812 MIR5701-3-201ENST00000578890 82 ntBASIC2.55□□□□□ -2
CTPS1P17812 MIR5701-1-201ENST00000585138 82 ntBASIC2.55□□□□□ -2
CTPS1P17812 RPL12P50-201ENST00000603116 116 ntBASIC2.55□□□□□ -2
CTPS1P17812 7SK.7-201ENST00000603504 247 ntBASIC2.55□□□□□ -2
CTPS1P17812 MIR5701-2-201ENST00000615634 82 ntBASIC2.55□□□□□ -2
CTPS1P17812 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.54□□□□□ -2
CTPS1P17812 RNU5B-2P-201ENST00000363036 113 ntBASIC2.54□□□□□ -2
CTPS1P17812 Y_RNA.138-201ENST00000363462 102 ntBASIC2.54□□□□□ -2
CTPS1P17812 Y_RNA.500-201ENST00000384466 111 ntBASIC2.54□□□□□ -2
CTPS1P17812 CBX3P9-201ENST00000402326 552 ntBASIC2.54□□□□□ -2
CTPS1P17812 RNA5SP494-201ENST00000410653 129 ntBASIC2.54□□□□□ -2
CTPS1P17812 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.54□□□□□ -2
CTPS1P17812 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.54□□□□□ -2
CTPS1P17812 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.54□□□□□ -2
CTPS1P17812 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.54□□□□□ -2
CTPS1P17812 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.54□□□□□ -2
CTPS1P17812 AC080013.2-201ENST00000460866 323 ntBASIC2.54□□□□□ -2
CTPS1P17812 AC073901.1-201ENST00000462471 408 ntBASIC2.54□□□□□ -2
CTPS1P17812 AC087477.1-201ENST00000465747 340 ntBASIC2.54□□□□□ -2
CTPS1P17812 RPL30P10-201ENST00000488148 337 ntBASIC2.54□□□□□ -2
CTPS1P17812 RPL23AP75-201ENST00000491601 451 ntBASIC2.54□□□□□ -2
CTPS1P17812 AC021146.2-201ENST00000504736 556 ntBASIC2.54□□□□□ -2
CTPS1P17812 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.54□□□□□ -2
CTPS1P17812 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.54□□□□□ -2
CTPS1P17812 RNU6-976P-201ENST00000516086 111 ntBASIC2.54□□□□□ -2
CTPS1P17812 RNU6-567P-201ENST00000516746 107 ntBASIC2.54□□□□□ -2
CTPS1P17812 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.54□□□□□ -2
CTPS1P17812 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.54□□□□□ -2
CTPS1P17812 SUB1P3-201ENST00000564581 315 ntBASIC2.54□□□□□ -2
CTPS1P17812 MIR3162-201ENST00000581818 82 ntBASIC2.54□□□□□ -2
CTPS1P17812 MIR4672-201ENST00000583126 81 ntBASIC2.54□□□□□ -2
CTPS1P17812 RPL30P11-203ENST00000598995 310 ntBASIC2.54□□□□□ -2
CTPS1P17812 AL356055.1-201ENST00000602528 446 ntBASIC2.54□□□□□ -2
CTPS1P17812 AL078605.1-201ENST00000603529 500 ntBASIC2.54□□□□□ -2
CTPS1P17812 Z98751.3-201ENST00000604447 521 ntBASIC2.54□□□□□ -2
CTPS1P17812 AL670379.2-201ENST00000604983 252 ntBASIC2.54□□□□□ -2
CTPS1P17812 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.54□□□□□ -2
CTPS1P17812 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.54□□□□□ -2
CTPS1P17812 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
CTPS1P17812 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CTPS1P17812 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
CTPS1P17812 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CTPS1P17812 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CTPS1P17812 RNU1-72P-201ENST00000362976 153 ntBASIC2.53□□□□□ -2
CTPS1P17812 Y_RNA.395-201ENST00000383945 109 ntBASIC2.53□□□□□ -2
CTPS1P17812 Y_RNA.445-201ENST00000384168 102 ntBASIC2.53□□□□□ -2
CTPS1P17812 Y_RNA.463-201ENST00000384271 102 ntBASIC2.53□□□□□ -2
CTPS1P17812 RNU6-1011P-201ENST00000384668 107 ntBASIC2.53□□□□□ -2
CTPS1P17812 RNU6-700P-201ENST00000391043 107 ntBASIC2.53□□□□□ -2
CTPS1P17812 MIR1302-11-201ENST00000408051 138 ntBASIC2.53□□□□□ -2
CTPS1P17812 MIR1302-9-201ENST00000408365 138 ntBASIC2.53□□□□□ -2
CTPS1P17812 MIR1302-10-201ENST00000408734 138 ntBASIC2.53□□□□□ -2
CTPS1P17812 MTCO3P29-201ENST00000432119 779 ntBASIC2.53□□□□□ -2
CTPS1P17812 Z82188.1-201ENST00000436709 154 ntBASIC2.53□□□□□ -2
CTPS1P17812 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.53□□□□□ -2
CTPS1P17812 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.53□□□□□ -2
CTPS1P17812 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms