Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNU6-53P-201ENST00000365367 106 ntBASIC0.81□□□□□ -2.28
TPM1P09493 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
TPM1P09493 AC114482.1-201ENST00000418010 247 ntBASIC0.81□□□□□ -2.28
TPM1P09493 AC063976.4-201ENST00000421971 163 ntBASIC0.81□□□□□ -2.28
TPM1P09493 AL606490.4-201ENST00000423117 127 ntBASIC0.81□□□□□ -2.28
TPM1P09493 MTND5P15-201ENST00000434246 349 ntBASIC0.81□□□□□ -2.28
TPM1P09493 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.81□□□□□ -2.28
TPM1P09493 AC091435.1-201ENST00000505442 584 ntBASIC0.81□□□□□ -2.28
TPM1P09493 AC116562.3-201ENST00000506136 177 ntBASIC0.81□□□□□ -2.28
TPM1P09493 PDCD5P2-201ENST00000507570 312 ntBASIC0.81□□□□□ -2.28
TPM1P09493 SNORA31.2-201ENST00000516019 134 ntBASIC0.81□□□□□ -2.28
TPM1P09493 AC068587.5-201ENST00000528506 175 ntBASIC0.81□□□□□ -2.28
TPM1P09493 AC098848.2-201ENST00000588023 330 ntBASIC0.81□□□□□ -2.28
TPM1P09493 RNU4-5P-201ENST00000607255 135 ntBASIC0.81□□□□□ -2.28
TPM1P09493 RNU6-545P-201ENST00000362681 104 ntBASIC0.8□□□□□ -2.28
TPM1P09493 MIR608-201ENST00000384820 100 ntBASIC0.8□□□□□ -2.28
TPM1P09493 RNU6-910P-201ENST00000390844 107 ntBASIC0.8□□□□□ -2.28
TPM1P09493 SNORD12-201ENST00000391002 90 ntBASIC0.8□□□□□ -2.28
TPM1P09493 MIR300-201ENST00000401138 83 ntBASIC0.8□□□□□ -2.28
TPM1P09493 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.8□□□□□ -2.28
TPM1P09493 MTATP6P16-201ENST00000434543 526 ntBASIC0.8□□□□□ -2.28
TPM1P09493 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
TPM1P09493 SNORD124-201ENST00000459577 104 ntBASIC0.8□□□□□ -2.28
TPM1P09493 TRBVA-201ENST00000498804 316 ntBASIC0.8□□□□□ -2.28
TPM1P09493 RNA5SP168-201ENST00000516642 112 ntBASIC0.8□□□□□ -2.28
TPM1P09493 RN7SKP49-201ENST00000516675 260 ntBASIC0.8□□□□□ -2.28
TPM1P09493 AC136628.3-201ENST00000521868 290 ntBASIC0.8□□□□□ -2.28
TPM1P09493 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.8□□□□□ -2.28
TPM1P09493 AP000942.3-201ENST00000603702 160 ntBASIC0.8□□□□□ -2.28
TPM1P09493 AL121992.2-201ENST00000606262 256 ntBASIC0.8□□□□□ -2.28
TPM1P09493 AC064807.4-201ENST00000607201 407 ntBASIC0.8□□□□□ -2.28
TPM1P09493 AC138649.3-201ENST00000622154 254 ntBASIC0.8□□□□□ -2.28
TPM1P09493 SNORD115-7-201ENST00000365306 82 ntBASIC0.79□□□□□ -2.28
TPM1P09493 MIR208B-201ENST00000401172 77 ntBASIC0.79□□□□□ -2.28
TPM1P09493 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.79□□□□□ -2.28
TPM1P09493 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.79□□□□□ -2.28
TPM1P09493 AP000889.1-201ENST00000530968 660 ntBASIC0.79□□□□□ -2.28
TPM1P09493 AC021506.2-201ENST00000612354 169 ntBASIC0.79□□□□□ -2.28
TPM1P09493 AC009509.4-201ENST00000619202 509 ntBASIC0.79□□□□□ -2.28
TPM1P09493 AL136221.1-201ENST00000621449 509 ntBASIC0.79□□□□□ -2.28
TPM1P09493 snoU2-30.2-201ENST00000362805 70 ntBASIC0.78□□□□□ -2.28
TPM1P09493 SNORA33-201ENST00000363664 130 ntBASIC0.78□□□□□ -2.28
TPM1P09493 RNA5SP99-201ENST00000364020 114 ntBASIC0.78□□□□□ -2.28
TPM1P09493 RNU6-950P-201ENST00000384651 107 ntBASIC0.78□□□□□ -2.28
TPM1P09493 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.78□□□□□ -2.28
TPM1P09493 HSFY7P-201ENST00000432672 318 ntBASIC0.78□□□□□ -2.28
TPM1P09493 AC002429.1-201ENST00000437672 148 ntBASIC0.78□□□□□ -2.28
TPM1P09493 HSFY8P-201ENST00000437934 318 ntBASIC0.78□□□□□ -2.28
TPM1P09493 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.78□□□□□ -2.28
TPM1P09493 AF131216.2-201ENST00000512316 564 ntBASIC0.78□□□□□ -2.28
TPM1P09493 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.78□□□□□ -2.28
TPM1P09493 AC022616.3-201ENST00000523940 148 ntBASIC0.78□□□□□ -2.28
TPM1P09493 AC008250.2-201ENST00000615261 205 ntBASIC0.78□□□□□ -2.28
TPM1P09493 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.78□□□□□ -2.29
TPM1P09493 RNU6-1080P-201ENST00000383982 107 ntBASIC0.77□□□□□ -2.29
TPM1P09493 RNU6-1200P-201ENST00000384162 107 ntBASIC0.77□□□□□ -2.29
TPM1P09493 Y_RNA.504-201ENST00000384481 104 ntBASIC0.77□□□□□ -2.29
TPM1P09493 MIR200A-201ENST00000384875 90 ntBASIC0.77□□□□□ -2.29
TPM1P09493 RPL21P1-201ENST00000399532 476 ntBASIC0.77□□□□□ -2.29
TPM1P09493 MIR1283-1-201ENST00000408494 87 ntBASIC0.77□□□□□ -2.29
TPM1P09493 RNU6-1054P-201ENST00000411293 104 ntBASIC0.77□□□□□ -2.29
TPM1P09493 AL117339.3-201ENST00000418733 162 ntBASIC0.77□□□□□ -2.29
TPM1P09493 AC092473.1-201ENST00000441098 221 ntBASIC0.77□□□□□ -2.29
TPM1P09493 AC008628.2-201ENST00000502605 298 ntBASIC0.77□□□□□ -2.29
TPM1P09493 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.77□□□□□ -2.29
TPM1P09493 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.77□□□□□ -2.29
TPM1P09493 TPRKBP2-201ENST00000565969 475 ntBASIC0.77□□□□□ -2.29
TPM1P09493 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.77□□□□□ -2.29
TPM1P09493 AC008751.2-201ENST00000597885 980 ntBASIC0.77□□□□□ -2.29
TPM1P09493 AL929325.1-201ENST00000603096 117 ntBASIC0.77□□□□□ -2.29
TPM1P09493 Z99289.3-201ENST00000605586 594 ntBASIC0.77□□□□□ -2.29
TPM1P09493 AC108706.1-201ENST00000611053 297 ntBASIC0.77□□□□□ -2.29
TPM1P09493 AC138749.5-201ENST00000611461 208 ntBASIC0.77□□□□□ -2.29
TPM1P09493 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.77□□□□□ -2.29
TPM1P09493 AC116165.2-201ENST00000616705 206 ntBASIC0.77□□□□□ -2.29
TPM1P09493 AL391994.1-201ENST00000254724 282 ntBASIC0.76□□□□□ -2.29
TPM1P09493 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
TPM1P09493 RNU6-562P-201ENST00000362731 107 ntBASIC0.76□□□□□ -2.29
TPM1P09493 RNU5F-6P-201ENST00000362979 116 ntBASIC0.76□□□□□ -2.29
TPM1P09493 RNY1P12-201ENST00000364251 105 ntBASIC0.76□□□□□ -2.29
TPM1P09493 RNU6-1303P-201ENST00000364841 107 ntBASIC0.76□□□□□ -2.29
TPM1P09493 RNU6-715P-201ENST00000365204 103 ntBASIC0.76□□□□□ -2.29
TPM1P09493 FGF7P8-201ENST00000402994 292 ntBASIC0.76□□□□□ -2.29
TPM1P09493 RNU2-8P-201ENST00000410727 190 ntBASIC0.76□□□□□ -2.29
TPM1P09493 AC073614.1-201ENST00000438690 650 ntBASIC0.76□□□□□ -2.29
TPM1P09493 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.76□□□□□ -2.29
TPM1P09493 AC048334.1-201ENST00000477975 159 ntBASIC0.76□□□□□ -2.29
TPM1P09493 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.76□□□□□ -2.29
TPM1P09493 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.76□□□□□ -2.29
TPM1P09493 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.76□□□□□ -2.29
TPM1P09493 RNU6-113P-201ENST00000516653 101 ntBASIC0.76□□□□□ -2.29
TPM1P09493 AC090142.3-201ENST00000519012 385 ntBASIC0.76□□□□□ -2.29
TPM1P09493 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.76□□□□□ -2.29
TPM1P09493 MIR4753-201ENST00000585119 83 ntBASIC0.76□□□□□ -2.29
TPM1P09493 AC091805.2-201ENST00000603848 235 ntBASIC0.76□□□□□ -2.29
TPM1P09493 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
TPM1P09493 Y_RNA.124-201ENST00000363339 93 ntBASIC0.75□□□□□ -2.29
TPM1P09493 RNU6-550P-201ENST00000391057 101 ntBASIC0.75□□□□□ -2.29
TPM1P09493 RNU6-482P-201ENST00000391068 107 ntBASIC0.75□□□□□ -2.29
TPM1P09493 AC011233.1-201ENST00000422812 283 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms