Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
VPS4BO75351 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
VPS4BO75351 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
VPS4BO75351 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
VPS4BO75351 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VPS4BO75351 MIR449A-201ENST00000362113 91 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 Y_RNA.40-201ENST00000362645 93 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 SNORD114-19-201ENST00000363072 75 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 Y_RNA.152-201ENST00000363578 100 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 RNU4-50P-201ENST00000364361 141 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 U3.13-201ENST00000364804 214 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 CD24P4-201ENST00000382840 243 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 RNU6-196P-201ENST00000384315 107 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 RNY3P4-201ENST00000384428 101 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 Y_RNA.574-201ENST00000384766 95 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 MIR32-201ENST00000384965 70 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 RPL21P1-201ENST00000399532 476 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 DPH3P2-201ENST00000422618 250 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 AC012306.1-201ENST00000423267 114 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 AC022018.1-201ENST00000430685 241 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 U8.22-201ENST00000459141 133 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 AP001324.2-201ENST00000461163 319 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 RN7SL863P-201ENST00000462370 296 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 AIG1P1-201ENST00000503376 148 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.99□□□□□ -1.93
VPS4BO75351 AC034114.1-201ENST00000520293 285 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.99□□□□□ -1.93
VPS4BO75351 AC131281.1-201ENST00000522984 164 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 COX6CP5-201ENST00000527162 228 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS4BO75351 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS4BO75351 AC105137.2-201ENST00000569073 466 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 AC110079.1-202ENST00000635213 138 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 AL109809.4-201ENST00000603520 2185 ntBASIC2.99□□□□□ -1.93
VPS4BO75351 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.99□□□□□ -1.93
VPS4BO75351 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VPS4BO75351 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.99□□□□□ -1.93
VPS4BO75351 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
VPS4BO75351 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VPS4BO75351 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS4BO75351 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS4BO75351 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS4BO75351 Y_RNA.176-201ENST00000363815 109 ntBASIC2.98□□□□□ -1.93
VPS4BO75351 SET-203ENST00000372688 801 ntTSL 2 BASIC2.98□□□□□ -1.93
VPS4BO75351 RNU6-1027P-201ENST00000383998 107 ntBASIC2.98□□□□□ -1.93
VPS4BO75351 SNORD15B-201ENST00000384714 146 ntBASIC2.98□□□□□ -1.93
VPS4BO75351 MIR628-201ENST00000385229 95 ntBASIC2.98□□□□□ -1.93
VPS4BO75351 MIR767-201ENST00000390228 109 ntBASIC2.98□□□□□ -1.93
VPS4BO75351 AL512633.1-201ENST00000399931 655 ntBASIC2.98□□□□□ -1.93
VPS4BO75351 AL133475.1-201ENST00000404414 305 ntBASIC2.98□□□□□ -1.93
VPS4BO75351 AL358075.3-201ENST00000426289 226 ntBASIC2.98□□□□□ -1.93
VPS4BO75351 EIF1P2-201ENST00000428233 350 ntBASIC2.98□□□□□ -1.93
VPS4BO75351 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.98□□□□□ -1.93
VPS4BO75351 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS4BO75351 MRPS35P2-201ENST00000508242 191 ntBASIC2.98□□□□□ -1.93
VPS4BO75351 RNU5F-2P-201ENST00000516066 82 ntBASIC2.98□□□□□ -1.93
VPS4BO75351 RNU6-567P-201ENST00000516746 107 ntBASIC2.98□□□□□ -1.93
VPS4BO75351 SNORA31.16-201ENST00000516773 139 ntBASIC2.98□□□□□ -1.93
VPS4BO75351 MIR4506-201ENST00000584693 77 ntBASIC2.98□□□□□ -1.93
VPS4BO75351 MIR622-201ENST00000638396 96 ntBASIC2.98□□□□□ -1.93
VPS4BO75351 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS4BO75351 AC108206.1-201ENST00000570186 4159 ntBASIC2.97□□□□□ -1.93
VPS4BO75351 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VPS4BO75351 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.97□□□□□ -1.93
VPS4BO75351 Z75746.1-201ENST00000440243 2080 ntBASIC2.97□□□□□ -1.93
VPS4BO75351 Y_RNA.452-201ENST00000384202 108 ntBASIC2.97□□□□□ -1.93
VPS4BO75351 RNU6-708P-201ENST00000384217 107 ntBASIC2.97□□□□□ -1.93
VPS4BO75351 AL590135.1-201ENST00000422215 156 ntBASIC2.97□□□□□ -1.93
VPS4BO75351 AC019205.3-201ENST00000424573 156 ntBASIC2.97□□□□□ -1.93
VPS4BO75351 AC104332.2-201ENST00000429959 156 ntBASIC2.97□□□□□ -1.93
VPS4BO75351 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS4BO75351 AC016700.2-201ENST00000446011 156 ntBASIC2.97□□□□□ -1.93
VPS4BO75351 SNRPGP7-201ENST00000469016 106 ntBASIC2.97□□□□□ -1.93
VPS4BO75351 AC090525.1-201ENST00000479116 478 ntBASIC2.97□□□□□ -1.93
VPS4BO75351 RN7SL20P-201ENST00000488827 297 ntBASIC2.97□□□□□ -1.93
VPS4BO75351 HMGB1P35-201ENST00000503360 598 ntBASIC2.97□□□□□ -1.93
VPS4BO75351 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS4BO75351 RNU6-1114P-201ENST00000516022 107 ntBASIC2.97□□□□□ -1.93
VPS4BO75351 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
VPS4BO75351 RPS29P30-201ENST00000600975 111 ntBASIC2.97□□□□□ -1.93
VPS4BO75351 AL390123.1-201ENST00000603216 237 ntBASIC2.97□□□□□ -1.93
VPS4BO75351 AC010205.1-201ENST00000616668 449 ntBASIC2.97□□□□□ -1.93
VPS4BO75351 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.97□□□□□ -1.93
VPS4BO75351 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS4BO75351 RNU1-76P-201ENST00000362903 159 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 Y_RNA.214-201ENST00000364201 112 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 RNA5SP139-201ENST00000364340 117 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 RNU6-611P-201ENST00000384276 104 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 SNORA51.11-201ENST00000384442 131 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 RNU6-159P-201ENST00000391080 106 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 RNA5SP354-201ENST00000391247 136 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 OOSP1P1-201ENST00000423265 274 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS4BO75351 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS4BO75351 RPL21P2-201ENST00000440049 481 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS4BO75351 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS4BO75351 AC007215.1-201ENST00000464893 276 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 AP000870.1-201ENST00000472927 406 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 SNORA31.6-201ENST00000516241 130 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms