Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL139281.1-201ENST00000422120 335 ntBASIC2.89□□□□□ -1.95
PHGDHO43175 AL445687.1-201ENST00000439946 251 ntBASIC2.89□□□□□ -1.95
PHGDHO43175 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.89□□□□□ -1.95
PHGDHO43175 UBBP3-201ENST00000445497 241 ntBASIC2.89□□□□□ -1.95
PHGDHO43175 RNU6-327P-201ENST00000516270 127 ntBASIC2.89□□□□□ -1.95
PHGDHO43175 RNU4-77P-201ENST00000516692 156 ntBASIC2.89□□□□□ -1.95
PHGDHO43175 RNU6-56P-201ENST00000516986 93 ntBASIC2.89□□□□□ -1.95
PHGDHO43175 RNU6-58P-201ENST00000517143 103 ntBASIC2.89□□□□□ -1.95
PHGDHO43175 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.89□□□□□ -1.95
PHGDHO43175 EIF4A1P12-201ENST00000551910 141 ntBASIC2.89□□□□□ -1.95
PHGDHO43175 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.89□□□□□ -1.95
PHGDHO43175 AC023043.3-201ENST00000593113 385 ntBASIC2.89□□□□□ -1.95
PHGDHO43175 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.89□□□□□ -1.95
PHGDHO43175 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.89□□□□□ -1.95
PHGDHO43175 AC008121.3-201ENST00000618726 433 ntBASIC2.89□□□□□ -1.95
PHGDHO43175 AL606534.2-204ENST00000635008 178 ntBASIC2.89□□□□□ -1.95
PHGDHO43175 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.89□□□□□ -1.95
PHGDHO43175 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
PHGDHO43175 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.88□□□□□ -1.95
PHGDHO43175 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
PHGDHO43175 AC091812.1-201ENST00000432235 1948 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.88□□□□□ -1.95
PHGDHO43175 AL035425.3-201ENST00000564206 4996 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 RNU6-738P-201ENST00000384531 106 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 MIR628-201ENST00000385229 95 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 AL031121.1-201ENST00000406553 254 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 Y_RNA.597-201ENST00000410463 100 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 AC104332.2-201ENST00000429959 156 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 AC092427.1-202ENST00000430569 476 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 AL445305.1-201ENST00000432577 575 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.88□□□□□ -1.95
PHGDHO43175 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.88□□□□□ -1.95
PHGDHO43175 EEF1B2P7-201ENST00000451177 676 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 CYP2C59P-201ENST00000457790 269 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 RN7SL499P-201ENST00000481141 276 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.88□□□□□ -1.95
PHGDHO43175 AC091826.1-201ENST00000514065 313 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 RNA5SP54-201ENST00000516951 92 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 AC091144.1-201ENST00000519573 138 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PHGDHO43175 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.88□□□□□ -1.95
PHGDHO43175 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.88□□□□□ -1.95
PHGDHO43175 HSBP1P1-201ENST00000555205 166 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.88□□□□□ -1.95
PHGDHO43175 AC006600.1-201ENST00000572529 153 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 AC090617.3-201ENST00000573670 475 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.88□□□□□ -1.95
PHGDHO43175 MIR5195-201ENST00000583555 115 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 AC016727.2-201ENST00000603988 621 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 SNORD58B-201ENST00000607313 66 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 PART1_1.1-201ENST00000611761 217 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 AC107871.2-201ENST00000612894 502 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 AL132822.1-201ENST00000617063 513 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 U2.1-201ENST00000618978 145 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.88□□□□□ -1.95
PHGDHO43175 MIR6733-201ENST00000635723 61 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 MIR4272-201ENST00000635924 64 ntBASIC2.88□□□□□ -1.95
PHGDHO43175 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.88□□□□□ -1.95
PHGDHO43175 FAM35CP-201ENST00000554755 2470 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PHGDHO43175 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.87□□□□□ -1.95
PHGDHO43175 RNU6-137P-201ENST00000363680 108 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 SNORD115-8-201ENST00000363856 82 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 SNORA71.1-201ENST00000364523 117 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 SNORD115-38-201ENST00000365037 82 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 RNU6-1160P-201ENST00000384546 104 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 MIR549A-201ENST00000385268 96 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 MRPL42P3-201ENST00000401492 326 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
PHGDHO43175 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.87□□□□□ -1.95
PHGDHO43175 RPS3AP12-201ENST00000443616 753 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.87□□□□□ -1.95
PHGDHO43175 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.87□□□□□ -1.95
PHGDHO43175 AC103975.1-201ENST00000482506 483 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.87□□□□□ -1.95
PHGDHO43175 RNA5SP76-201ENST00000516277 87 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 GNAI2P1-201ENST00000541815 315 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.87□□□□□ -1.95
PHGDHO43175 UBL5P4-201ENST00000562584 236 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 AC090517.1-201ENST00000569307 266 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 AC006504.6-201ENST00000590142 199 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.87□□□□□ -1.95
PHGDHO43175 AL138825.1-201ENST00000618587 192 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 AC091953.5-201ENST00000622919 233 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 AC138305.3-201ENST00000624988 240 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 AC000403.1-201ENST00000613696 3585 ntBASIC2.87□□□□□ -1.95
PHGDHO43175 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PHGDHO43175 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PHGDHO43175 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PHGDHO43175 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.86□□□□□ -1.95
PHGDHO43175 AC005592.1-201ENST00000566527 1640 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 ZNF204P-201ENST00000416749 2397 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 RNA5SP374-201ENST00000362939 125 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 SNORA70.4-201ENST00000365509 134 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 U8.9-201ENST00000365667 134 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 AC117470.1-201ENST00000381974 330 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 RNU6-639P-201ENST00000384074 107 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 Y_RNA.557-201ENST00000384680 107 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 Y_RNA.645-201ENST00000391229 102 ntBASIC2.86□□□□□ -1.95
PHGDHO43175 RNU2-63P-201ENST00000410792 194 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms