Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RNF41Q9H4P4 SNORA16B-201ENST00000364674 135 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 RNU1-148P-201ENST00000384472 162 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 Y_RNA.599-201ENST00000410489 109 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 AL356379.1-201ENST00000414105 126 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 RPL23AP95-201ENST00000426806 265 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.96□□□□□ -2.1
RNF41Q9H4P4 RNA5SP233-201ENST00000459153 113 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 AC108210.2-201ENST00000503681 201 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 AK3P2-201ENST00000507976 429 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 FAM206BP-201ENST00000510179 541 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 SNORA19.2-201ENST00000516013 114 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 RNU6-323P-201ENST00000521915 107 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.96□□□□□ -2.1
RNF41Q9H4P4 AC015712.3-201ENST00000559380 164 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 AC012493.3-201ENST00000604494 112 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 AL357078.3-201ENST00000607528 618 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 U4atac.1-201ENST00000618345 95 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 AC091932.3-201ENST00000624223 323 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 AL450472.1-202ENST00000637286 180 ntBASIC1.96□□□□□ -2.1
RNF41Q9H4P4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
RNF41Q9H4P4 RNU6-212P-201ENST00000362642 104 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 RNU1-23P-201ENST00000363361 144 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 RNU6-1141P-201ENST00000364520 107 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 RNA5SP190-201ENST00000365222 118 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 Y_RNA.373-201ENST00000365600 103 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 RNU6-1274P-201ENST00000384557 107 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RNF41Q9H4P4 RNU6-1148P-201ENST00000410992 104 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 AL359672.1-201ENST00000442302 409 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.95□□□□□ -2.1
RNF41Q9H4P4 RPS29P27-201ENST00000463711 170 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.95□□□□□ -2.1
RNF41Q9H4P4 AC091874.1-201ENST00000511402 339 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 RPL39P5-202ENST00000512505 151 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 SNORA48.11-201ENST00000517015 89 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.95□□□□□ -2.1
RNF41Q9H4P4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.95□□□□□ -2.1
RNF41Q9H4P4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.95□□□□□ -2.1
RNF41Q9H4P4 CBX3P4-201ENST00000538909 354 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 AC025423.5-201ENST00000550230 219 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 AC100830.2-201ENST00000581636 240 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.95□□□□□ -2.1
RNF41Q9H4P4 AC107304.1-201ENST00000604229 296 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 AP001836.1-201ENST00000604675 523 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 AL355297.2-201ENST00000604792 129 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 ELOCP5-201ENST00000604924 333 ntBASIC1.95□□□□□ -2.1
RNF41Q9H4P4 Y_RNA.295-201ENST00000364918 102 ntBASIC1.94□□□□□ -2.1
RNF41Q9H4P4 MIR450B-201ENST00000401182 78 ntBASIC1.94□□□□□ -2.1
RNF41Q9H4P4 AP000275.1-201ENST00000411943 390 ntBASIC1.94□□□□□ -2.1
RNF41Q9H4P4 AL133396.1-201ENST00000432048 687 ntBASIC1.94□□□□□ -2.1
RNF41Q9H4P4 NDUFA5P4-201ENST00000436704 385 ntBASIC1.94□□□□□ -2.1
RNF41Q9H4P4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.94□□□□□ -2.1
RNF41Q9H4P4 CYP2C59P-201ENST00000457790 269 ntBASIC1.94□□□□□ -2.1
RNF41Q9H4P4 RNU6-1037P-201ENST00000459571 107 ntBASIC1.94□□□□□ -2.1
RNF41Q9H4P4 AC082651.2-201ENST00000496833 166 ntBASIC1.94□□□□□ -2.1
RNF41Q9H4P4 MTCYBP18-201ENST00000501056 747 ntBASIC1.94□□□□□ -2.1
RNF41Q9H4P4 RNU6-718P-201ENST00000516166 105 ntBASIC1.94□□□□□ -2.1
RNF41Q9H4P4 RNU2-44P-201ENST00000516795 194 ntBASIC1.94□□□□□ -2.1
RNF41Q9H4P4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.94□□□□□ -2.1
RNF41Q9H4P4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.94□□□□□ -2.1
RNF41Q9H4P4 TRAV32-201ENST00000553993 340 ntBASIC1.94□□□□□ -2.1
RNF41Q9H4P4 AL356157.2-201ENST00000605122 111 ntBASIC1.94□□□□□ -2.1
RNF41Q9H4P4 AC018889.1-201ENST00000605372 397 ntBASIC1.94□□□□□ -2.1
RNF41Q9H4P4 AC068944.2-201ENST00000610373 403 ntBASIC1.94□□□□□ -2.1
RNF41Q9H4P4 AC007014.2-201ENST00000615581 479 ntBASIC1.94□□□□□ -2.1
RNF41Q9H4P4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
RNF41Q9H4P4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
RNF41Q9H4P4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RNF41Q9H4P4 snoU2_19.1-201ENST00000362361 80 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 RNU4-15P-201ENST00000362613 141 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 RNU6-944P-201ENST00000364023 107 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 RNA5SP240-201ENST00000365355 128 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RNF41Q9H4P4 Y_RNA.453-201ENST00000384223 109 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 SNORA46.1-201ENST00000391069 153 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 SNORA26.3-201ENST00000391119 136 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 RN7SKP61-201ENST00000410642 295 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 RNU2-63P-201ENST00000410792 194 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 RNU6-1245P-201ENST00000411130 106 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 FCF1P9-201ENST00000412546 282 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 EIF1P1-201ENST00000421436 341 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.93□□□□□ -2.1
RNF41Q9H4P4 AC092989.1-201ENST00000481235 277 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 HMGB1P35-201ENST00000503360 598 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.93□□□□□ -2.1
RNF41Q9H4P4 RNU6-586P-201ENST00000517265 104 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 AC233702.2-202ENST00000562547 291 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.93□□□□□ -2.1
RNF41Q9H4P4 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.93□□□□□ -2.1
RNF41Q9H4P4 CPDP1-201ENST00000579660 283 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 MIR4524B-201ENST00000581569 115 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 AL078605.1-201ENST00000603529 500 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 AL161423.1-201ENST00000613700 262 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 AC090617.10-201ENST00000624308 134 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 SNORA43.4-201ENST00000629559 138 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 MTND4P23-201ENST00000447723 1363 ntBASIC1.93□□□□□ -2.1
RNF41Q9H4P4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
RNF41Q9H4P4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
RNF41Q9H4P4 AC006026.1-201ENST00000444025 1803 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms