Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 U8.18-201ENST00000459285 133 ntBASIC3.44□□□□□ -1.86
VPS11Q9H270 Y_RNA.638-201ENST00000459374 113 ntBASIC3.44□□□□□ -1.86
VPS11Q9H270 AC091179.1-201ENST00000461606 579 ntBASIC3.44□□□□□ -1.86
VPS11Q9H270 TOMM22P6-201ENST00000465035 409 ntBASIC3.44□□□□□ -1.86
VPS11Q9H270 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.44□□□□□ -1.86
VPS11Q9H270 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS11Q9H270 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VPS11Q9H270 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS11Q9H270 ADAM3A-203ENST00000461344 2157 ntBASIC3.44□□□□□ -1.86
VPS11Q9H270 RNU6-428P-201ENST00000362942 107 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 RNU6-215P-201ENST00000365169 102 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS11Q9H270 SNORD116-18-201ENST00000383961 92 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 RNU6-926P-201ENST00000384075 107 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 Y_RNA.497-201ENST00000384447 98 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 Y_RNA.568-201ENST00000384742 113 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 RNA5SP354-201ENST00000391247 136 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 Y_RNA.629-201ENST00000411368 105 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 RPS27P26-201ENST00000494583 239 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 Y_RNA.706-201ENST00000516933 99 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 MIR2355-201ENST00000517199 87 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 AC090617.3-201ENST00000573670 475 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 SRGNP1-201ENST00000603392 451 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 AC107294.3-201ENST00000609211 526 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 AC084757.4-201ENST00000616350 526 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 AC090617.7-201ENST00000623952 126 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 AC110079.1-202ENST00000635213 138 ntBASIC3.43□□□□□ -1.86
VPS11Q9H270 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS11Q9H270 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS11Q9H270 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
VPS11Q9H270 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS11Q9H270 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS11Q9H270 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
VPS11Q9H270 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS11Q9H270 Y_RNA.446-201ENST00000384178 104 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 RNU6-417P-201ENST00000384712 107 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 MIR518D-201ENST00000385014 87 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 MIR10A-201ENST00000385043 110 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 Y_RNA.580-201ENST00000391004 95 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 Y_RNA.586-201ENST00000391146 98 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 AC096649.2-201ENST00000416186 393 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 AL035423.1-201ENST00000420331 213 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 AL162725.1-201ENST00000435405 301 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS11Q9H270 SNORD2.1-201ENST00000458762 69 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 AC092185.1-201ENST00000491371 97 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS11Q9H270 AC006199.1-201ENST00000548728 219 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 MIR4423-201ENST00000580922 80 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 AC010928.2-201ENST00000588017 287 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 AC060766.3-201ENST00000591442 263 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 AP000787.2-201ENST00000604432 568 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 AC005046.1-201ENST00000608515 625 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS11Q9H270 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS11Q9H270 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS11Q9H270 IGHVIII-44-202ENST00000636235 289 ntBASIC3.42□□□□□ -1.86
VPS11Q9H270 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS11Q9H270 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
VPS11Q9H270 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
VPS11Q9H270 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS11Q9H270 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS11Q9H270 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS11Q9H270 AC135776.4-201ENST00000624300 1904 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 UBE2WP1-201ENST00000362030 340 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 MIR148B-201ENST00000362252 99 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 Y_RNA.272-201ENST00000364696 102 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 RNU6-818P-201ENST00000364837 108 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 Y_RNA.308-201ENST00000365043 101 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 RNU6-44P-201ENST00000384045 107 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 Y_RNA.569-201ENST00000384749 103 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 MIR186-201ENST00000384988 86 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 RNU6-750P-201ENST00000390946 107 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 ATP5A1P2-201ENST00000412323 255 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 MTCO1P5-201ENST00000433573 344 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS11Q9H270 AP001025.1-201ENST00000486139 332 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 AC091959.1-201ENST00000495857 238 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 AC093663.1-201ENST00000497190 394 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS11Q9H270 Y_RNA.679-201ENST00000516416 91 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 SNORD19.2-201ENST00000516978 73 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS11Q9H270 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS11Q9H270 AC106785.1-201ENST00000565935 262 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 SNORD113-5-201ENST00000607261 78 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.41□□□□□ -1.86
VPS11Q9H270 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS11Q9H270 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
VPS11Q9H270 Y_RNA.123-201ENST00000363338 102 ntBASIC3.4□□□□□ -1.87
VPS11Q9H270 RNU6-898P-201ENST00000365627 104 ntBASIC3.4□□□□□ -1.87
VPS11Q9H270 RNU6-1289P-201ENST00000384431 106 ntBASIC3.4□□□□□ -1.87
VPS11Q9H270 RNU2-49P-201ENST00000410666 184 ntBASIC3.4□□□□□ -1.87
VPS11Q9H270 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS11Q9H270 TOMM20P4-201ENST00000427861 435 ntBASIC3.4□□□□□ -1.87
VPS11Q9H270 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.4□□□□□ -1.87
VPS11Q9H270 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS11Q9H270 RNU7-175P-201ENST00000515915 61 ntBASIC3.4□□□□□ -1.87
VPS11Q9H270 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.4□□□□□ -1.87
VPS11Q9H270 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms