Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC026585.1-201ENST00000619582 524 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TRIM4Q9C037 RNU6-1285P-201ENST00000363480 105 ntBASIC0.62□□□□□ -2.31
TRIM4Q9C037 RNA5SP259-201ENST00000365541 109 ntBASIC0.62□□□□□ -2.31
TRIM4Q9C037 RNU6-418P-201ENST00000384035 107 ntBASIC0.62□□□□□ -2.31
TRIM4Q9C037 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
TRIM4Q9C037 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.62□□□□□ -2.31
TRIM4Q9C037 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.62□□□□□ -2.31
TRIM4Q9C037 AC073910.1-201ENST00000445047 438 ntBASIC0.62□□□□□ -2.31
TRIM4Q9C037 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.62□□□□□ -2.31
TRIM4Q9C037 RNU6-88P-201ENST00000606801 100 ntBASIC0.62□□□□□ -2.31
TRIM4Q9C037 AL359547.2-201ENST00000615810 418 ntBASIC0.62□□□□□ -2.31
TRIM4Q9C037 AC087588.2-201ENST00000617667 426 ntBASIC0.62□□□□□ -2.31
TRIM4Q9C037 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.62□□□□□ -2.31
TRIM4Q9C037 SNORA4.2-201ENST00000365313 147 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 RNU6-413P-201ENST00000384115 107 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 Y_RNA.472-201ENST00000384322 102 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 MIR608-201ENST00000384820 100 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 RNU2-70P-201ENST00000410718 179 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 COX6CP10-201ENST00000416832 224 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 USP9YP14-201ENST00000430663 563 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.61□□□□□ -2.31
TRIM4Q9C037 AC073614.1-201ENST00000438690 650 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 AC007327.1-201ENST00000447461 264 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 SNORD124-201ENST00000459577 104 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.61□□□□□ -2.31
TRIM4Q9C037 AC013828.2-201ENST00000532487 235 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 AC023050.2-201ENST00000544968 387 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.61□□□□□ -2.31
TRIM4Q9C037 MTCO2P2-201ENST00000591258 225 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 AC110760.3-201ENST00000598794 467 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 AC068620.3-201ENST00000602749 560 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 AP002782.1-201ENST00000623107 614 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 AL356596.1-201ENST00000624230 379 ntBASIC0.61□□□□□ -2.31
TRIM4Q9C037 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.61□□□□□ -2.31
TRIM4Q9C037 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
TRIM4Q9C037 SNORA63.3-201ENST00000362682 132 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 RNA5SP499-201ENST00000363982 119 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 RNU6-723P-201ENST00000383973 107 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 AL117342.1-201ENST00000404861 406 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 AL031779.1-201ENST00000415663 330 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 MTCO1P21-201ENST00000416634 589 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 AL591043.1-201ENST00000432461 424 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 AC069257.2-201ENST00000441819 155 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.6□□□□□ -2.31
TRIM4Q9C037 HMGN1P10-201ENST00000474557 553 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 PDCD5P2-201ENST00000507570 312 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 RNU2-10P-201ENST00000516375 211 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 MIR4709-201ENST00000577272 72 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 AL158032.1-201ENST00000605401 106 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 AC092106.3-201ENST00000611308 722 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 AC126177.8-201ENST00000618339 1015 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 AC097372.5-201ENST00000623665 376 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 AC126544.2-201ENST00000625174 749 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 SNORD98-201ENST00000636377 67 ntBASIC0.6□□□□□ -2.31
TRIM4Q9C037 MTND4P16-201ENST00000466108 1367 ntBASIC0.59□□□□□ -2.31
TRIM4Q9C037 SNORD114-24-201ENST00000365029 72 ntBASIC0.59□□□□□ -2.31
TRIM4Q9C037 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.59□□□□□ -2.31
TRIM4Q9C037 AC022447.4-201ENST00000504053 364 ntBASIC0.59□□□□□ -2.31
TRIM4Q9C037 AC116353.3-201ENST00000511215 249 ntBASIC0.59□□□□□ -2.31
TRIM4Q9C037 RNU1-86P-201ENST00000516108 154 ntBASIC0.59□□□□□ -2.31
TRIM4Q9C037 RNU1-107P-201ENST00000516617 154 ntBASIC0.59□□□□□ -2.31
TRIM4Q9C037 RNA5SP168-201ENST00000516642 112 ntBASIC0.59□□□□□ -2.31
TRIM4Q9C037 AP003484.1-201ENST00000530974 250 ntBASIC0.59□□□□□ -2.31
TRIM4Q9C037 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.59□□□□□ -2.31
TRIM4Q9C037 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.59□□□□□ -2.31
TRIM4Q9C037 AC109446.1-201ENST00000566172 220 ntBASIC0.59□□□□□ -2.31
TRIM4Q9C037 MIR4636-201ENST00000582271 80 ntBASIC0.59□□□□□ -2.31
TRIM4Q9C037 AC105129.3-201ENST00000605455 485 ntBASIC0.59□□□□□ -2.31
TRIM4Q9C037 AC144521.1-201ENST00000607148 956 ntBASIC0.59□□□□□ -2.31
TRIM4Q9C037 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
TRIM4Q9C037 AC006386.1-201ENST00000619436 415 ntBASIC0.59□□□□□ -2.31
TRIM4Q9C037 ELL2P3-201ENST00000457883 1602 ntBASIC0.59□□□□□ -2.32
TRIM4Q9C037 Y_RNA.46-201ENST00000362695 102 ntBASIC0.58□□□□□ -2.32
TRIM4Q9C037 RNU6-527P-201ENST00000363425 104 ntBASIC0.58□□□□□ -2.32
TRIM4Q9C037 RNU6-142P-201ENST00000384019 107 ntBASIC0.58□□□□□ -2.32
TRIM4Q9C037 RNU6-298P-201ENST00000390888 96 ntBASIC0.58□□□□□ -2.32
TRIM4Q9C037 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.58□□□□□ -2.32
TRIM4Q9C037 MTCYBP39-201ENST00000437562 491 ntBASIC0.58□□□□□ -2.32
TRIM4Q9C037 AC010531.2-201ENST00000465012 153 ntBASIC0.58□□□□□ -2.32
TRIM4Q9C037 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.58□□□□□ -2.32
TRIM4Q9C037 RNU6-1041P-201ENST00000516254 102 ntBASIC0.58□□□□□ -2.32
TRIM4Q9C037 SNORA62.5-201ENST00000516634 120 ntBASIC0.58□□□□□ -2.32
TRIM4Q9C037 MTND2P7-201ENST00000521337 640 ntBASIC0.58□□□□□ -2.32
TRIM4Q9C037 AP002453.2-201ENST00000533503 320 ntBASIC0.58□□□□□ -2.32
TRIM4Q9C037 AC068587.4-201ENST00000533893 186 ntBASIC0.58□□□□□ -2.32
TRIM4Q9C037 AC123904.2-201ENST00000548059 300 ntBASIC0.58□□□□□ -2.32
TRIM4Q9C037 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.58□□□□□ -2.32
TRIM4Q9C037 MTND4LP25-201ENST00000570218 163 ntBASIC0.58□□□□□ -2.32
TRIM4Q9C037 AL121895.2-201ENST00000619558 447 ntBASIC0.58□□□□□ -2.32
TRIM4Q9C037 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.58□□□□□ -2.32
TRIM4Q9C037 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
TRIM4Q9C037 SNORD31B-201ENST00000364977 69 ntBASIC0.57□□□□□ -2.32
TRIM4Q9C037 RNU5E-7P-201ENST00000365290 117 ntBASIC0.57□□□□□ -2.32
TRIM4Q9C037 VTRNA1-3-201ENST00000365645 89 ntBASIC0.57□□□□□ -2.32
TRIM4Q9C037 MIR605-201ENST00000385078 83 ntBASIC0.57□□□□□ -2.32
TRIM4Q9C037 RNU6-910P-201ENST00000390844 107 ntBASIC0.57□□□□□ -2.32
TRIM4Q9C037 MIR1265-201ENST00000408444 86 ntBASIC0.57□□□□□ -2.32
TRIM4Q9C037 AC019070.1-201ENST00000415008 1024 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms