Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC068533.2-201ENST00000411872 306 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 AL161935.2-201ENST00000414627 60 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.25□□□□□ -2.37
TTC28Q96AY4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.25□□□□□ -2.37
TTC28Q96AY4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
TTC28Q96AY4 AL589872.1-201ENST00000426602 288 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.25□□□□□ -2.37
TTC28Q96AY4 AL157398.1-201ENST00000452981 186 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 RPL17P19-201ENST00000489069 552 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 MTCYBP40-201ENST00000509390 1135 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 AC093259.1-201ENST00000509755 300 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 AC025465.3-201ENST00000510570 311 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 RNU6-143P-201ENST00000516942 93 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.25□□□□□ -2.37
TTC28Q96AY4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
TTC28Q96AY4 ZNF971P-201ENST00000562068 1249 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 MIR3912-201ENST00000577566 105 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 BNIP3P30-201ENST00000601184 574 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 AP003465.2-201ENST00000602571 373 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 SNRPGP20-201ENST00000604477 205 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 AC026741.1-201ENST00000605892 482 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.25□□□□□ -2.37
TTC28Q96AY4 Y_RNA.361-201ENST00000365515 120 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 SUGT1P1-201ENST00000379514 476 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 U6.112-201ENST00000384129 70 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 Y_RNA.452-201ENST00000384202 108 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 MIR181B2-201ENST00000385004 89 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 RNU6-278P-201ENST00000390945 109 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
TTC28Q96AY4 AL117342.1-201ENST00000404861 406 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 Y_RNA.597-201ENST00000410463 100 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.25□□□□□ -2.37
TTC28Q96AY4 MTCYBP5-201ENST00000423752 1135 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 SNX2P2-201ENST00000424553 323 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 GTF2IP3-201ENST00000433887 494 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 MTND2P4-201ENST00000445034 1004 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.25□□□□□ -2.37
TTC28Q96AY4 PAXBP1P1-201ENST00000449315 447 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 GAPDHP17-201ENST00000449858 1001 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.25□□□□□ -2.37
TTC28Q96AY4 RNU1-131P-201ENST00000458943 161 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 Y_RNA.653-201ENST00000459091 95 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.25□□□□□ -2.37
TTC28Q96AY4 SLC2A13P1-201ENST00000531560 322 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 AL356057.1-201ENST00000533798 831 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 AC093012.1-202ENST00000549403 582 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 AL513534.2-201ENST00000603836 250 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 AL450270.1-201ENST00000606160 391 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 RNU4-5P-201ENST00000607255 135 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 AC231657.1-201ENST00000624313 397 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 MIR16-2-201ENST00000362117 81 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 Y_RNA.225-201ENST00000364326 97 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 RNU6-512P-201ENST00000364438 103 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC083799.1-201ENST00000366451 910 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 Y_RNA.494-201ENST00000384432 111 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 RNU6-540P-201ENST00000384622 101 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 MT-TM-201ENST00000387377 68 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AL357139.1-201ENST00000407792 426 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC114482.1-201ENST00000418010 247 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 DEFB130D-201ENST00000426866 237 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 MTCO2P12-201ENST00000427426 682 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.24□□□□□ -2.37
TTC28Q96AY4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC010631.1-201ENST00000474150 156 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC108729.2-201ENST00000476543 840 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 MTND2P33-201ENST00000506452 1031 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.24□□□□□ -2.37
TTC28Q96AY4 MIR3664-201ENST00000579074 99 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC025449.1-201ENST00000603896 529 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC105129.3-201ENST00000605455 485 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC092354.1-201ENST00000606057 376 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC008536.2-201ENST00000607284 349 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 MIR8084-201ENST00000614105 89 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC090517.2-201ENST00000614966 680 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC120349.2-201ENST00000625002 298 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC134026.1-201ENST00000623249 2239 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.24□□□□□ -2.37
TTC28Q96AY4 SNORD116-20-201ENST00000384529 92 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 RNU6-658P-201ENST00000384606 106 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 RNU6-296P-201ENST00000384608 107 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.24□□□□□ -2.37
TTC28Q96AY4 RPEP5-201ENST00000441137 268 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.24□□□□□ -2.37
TTC28Q96AY4 AL049830.1-201ENST00000468034 425 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.24□□□□□ -2.37
TTC28Q96AY4 SNORA31.3-201ENST00000516029 96 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 RN7SKP88-201ENST00000516847 250 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC091163.3-201ENST00000518269 1144 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.24□□□□□ -2.37
TTC28Q96AY4 AL136520.1-202ENST00000555494 763 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC025678.1-201ENST00000567861 338 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.24□□□□□ -2.37
TTC28Q96AY4 MIR4667-201ENST00000578933 66 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AC060771.1-201ENST00000582031 164 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AL445435.1-201ENST00000604232 665 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms