Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 RN7SL297P-201ENST00000483161 293 ntBASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 AC090096.1-201ENST00000489168 390 ntBASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 CBX3P8-201ENST00000532412 525 ntBASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 AC090897.2-201ENST00000581715 130 ntBASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 AC005014.2-201ENST00000607795 599 ntBASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 AC091925.1-201ENST00000623204 462 ntBASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 RBBP8P1-201ENST00000449447 1844 ntBASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 Y_RNA.132-201ENST00000363421 102 ntBASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 PMCHL1-202ENST00000423102 261 ntBASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 AC004383.1-201ENST00000438135 289 ntBASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 snoU13.23-201ENST00000458863 104 ntBASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 Y_RNA.638-201ENST00000459374 113 ntBASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 AC022493.2-201ENST00000506122 481 ntBASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 DNAJC8P1-201ENST00000554535 372 ntBASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 MIR6873-201ENST00000622788 63 ntBASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 ZNF299P-201ENST00000406845 1804 ntBASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 MTND4P27-201ENST00000450813 1354 ntBASIC3.11□□□□□ -1.91
RAPGEF4Q8WZA2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 RNU6-595P-201ENST00000363944 107 ntBASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 Y_RNA.533-201ENST00000384596 114 ntBASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 AL590004.1-201ENST00000405321 300 ntBASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 AC107626.1-201ENST00000471084 183 ntBASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 RPS26P21-201ENST00000475397 348 ntBASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 AC068781.1-201ENST00000488231 618 ntBASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 RPL17P19-201ENST00000489069 552 ntBASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 RPS27P26-201ENST00000494583 239 ntBASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 SCARNA15.1-201ENST00000516384 125 ntBASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 MIR5701-3-201ENST00000578890 82 ntBASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 MIR5701-1-201ENST00000585138 82 ntBASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 MIR5701-2-201ENST00000615634 82 ntBASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RAPGEF4Q8WZA2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 Y_RNA.31-201ENST00000362574 102 ntBASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 Y_RNA.123-201ENST00000363338 102 ntBASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 U8.9-201ENST00000365667 134 ntBASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 RNU6-1222P-201ENST00000384615 107 ntBASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 MIR767-201ENST00000390228 109 ntBASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 AL035666.1-201ENST00000446195 348 ntBASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 AL163540.1-201ENST00000485382 386 ntBASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 RNU6-120P-201ENST00000516077 103 ntBASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 AC016256.1-201ENST00000547971 354 ntBASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 HMGB1P24-202ENST00000615653 685 ntBASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 AC110079.1-202ENST00000635213 138 ntBASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RAPGEF4Q8WZA2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RAPGEF4Q8WZA2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
RAPGEF4Q8WZA2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 Y_RNA.28-201ENST00000362554 111 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 SNORD114-1-201ENST00000362705 72 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 Y_RNA.48-201ENST00000362710 103 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 RNY1P16-201ENST00000363063 111 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 RNU6-1141P-201ENST00000364520 107 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 MIR544A-201ENST00000384855 91 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 RN7SKP61-201ENST00000410642 295 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 EIF1AXP1-201ENST00000419267 435 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 AC009414.1-201ENST00000427200 443 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 HMGN2P3-201ENST00000433603 273 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 RPL23AP50-201ENST00000434149 455 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 HMGN2P5-201ENST00000436882 273 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 OSTCP8-201ENST00000445117 448 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 AC012308.1-201ENST00000451232 178 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 AL441985.1-201ENST00000457727 251 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 RN7SKP282-201ENST00000516824 299 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 RNU6-699P-201ENST00000517081 110 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 RNU6-264P-201ENST00000517134 104 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 SNORA31.26-201ENST00000517250 137 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 MIR5007-201ENST00000583098 95 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 AC060766.3-201ENST00000591442 263 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 AC067747.1-201ENST00000608026 250 ntBASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RAPGEF4Q8WZA2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms