Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 Y_RNA.490-201ENST00000384413 102 ntBASIC2.26□□□□□ -2.05
CDH11P55287 MIR218-1-201ENST00000384999 110 ntBASIC2.26□□□□□ -2.05
CDH11P55287 SNORA75.4-201ENST00000391278 119 ntBASIC2.26□□□□□ -2.05
CDH11P55287 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.26□□□□□ -2.05
CDH11P55287 Z82205.1-201ENST00000428456 297 ntBASIC2.26□□□□□ -2.05
CDH11P55287 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.26□□□□□ -2.05
CDH11P55287 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.26□□□□□ -2.05
CDH11P55287 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.26□□□□□ -2.05
CDH11P55287 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CDH11P55287 AL353752.1-201ENST00000454946 260 ntBASIC2.26□□□□□ -2.05
CDH11P55287 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.26□□□□□ -2.05
CDH11P55287 RNU7-152P-201ENST00000458982 64 ntBASIC2.26□□□□□ -2.05
CDH11P55287 AC104564.1-201ENST00000493028 407 ntBASIC2.26□□□□□ -2.05
CDH11P55287 HMGB1P35-201ENST00000503360 598 ntBASIC2.26□□□□□ -2.05
CDH11P55287 AC016632.1-201ENST00000503994 196 ntBASIC2.26□□□□□ -2.05
CDH11P55287 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.26□□□□□ -2.05
CDH11P55287 ACA59.1-201ENST00000515966 143 ntBASIC2.26□□□□□ -2.05
CDH11P55287 RNA5SP148-201ENST00000516527 94 ntBASIC2.26□□□□□ -2.05
CDH11P55287 RNA5SP384-201ENST00000516615 116 ntBASIC2.26□□□□□ -2.05
CDH11P55287 SNORA31.16-201ENST00000516773 139 ntBASIC2.26□□□□□ -2.05
CDH11P55287 RNU6-1213P-201ENST00000517075 94 ntBASIC2.26□□□□□ -2.05
CDH11P55287 Y_RNA.718-201ENST00000517110 102 ntBASIC2.26□□□□□ -2.05
CDH11P55287 RNA5SP402-201ENST00000517148 110 ntBASIC2.26□□□□□ -2.05
CDH11P55287 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.26□□□□□ -2.05
CDH11P55287 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.26□□□□□ -2.05
CDH11P55287 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.26□□□□□ -2.05
CDH11P55287 AC105245.1-201ENST00000581934 244 ntBASIC2.26□□□□□ -2.05
CDH11P55287 AL158827.2-201ENST00000602494 330 ntBASIC2.26□□□□□ -2.05
CDH11P55287 AL713866.2-201ENST00000603579 219 ntBASIC2.26□□□□□ -2.05
CDH11P55287 AL356280.1-201ENST00000603614 379 ntBASIC2.26□□□□□ -2.05
CDH11P55287 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.26□□□□□ -2.05
CDH11P55287 MIR6895-201ENST00000613497 78 ntBASIC2.26□□□□□ -2.05
CDH11P55287 AL691447.3-201ENST00000635020 330 ntBASIC2.26□□□□□ -2.05
CDH11P55287 AL669831.3-213ENST00000636676 183 ntBASIC2.26□□□□□ -2.05
CDH11P55287 AC135776.4-201ENST00000624300 1904 ntBASIC2.26□□□□□ -2.05
CDH11P55287 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CDH11P55287 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDH11P55287 AC092268.1-201ENST00000342691 405 ntBASIC2.25□□□□□ -2.05
CDH11P55287 RNU6-212P-201ENST00000362642 104 ntBASIC2.25□□□□□ -2.05
CDH11P55287 RNU6-655P-201ENST00000362858 107 ntBASIC2.25□□□□□ -2.05
CDH11P55287 RNU5B-2P-201ENST00000363036 113 ntBASIC2.25□□□□□ -2.05
CDH11P55287 RNA5SP68-201ENST00000363885 119 ntBASIC2.25□□□□□ -2.05
CDH11P55287 SNORA67.1-201ENST00000364749 141 ntBASIC2.25□□□□□ -2.05
CDH11P55287 SNORA36A-201ENST00000384221 132 ntBASIC2.25□□□□□ -2.05
CDH11P55287 Y_RNA.646-201ENST00000410980 101 ntBASIC2.25□□□□□ -2.05
CDH11P55287 RNU6-1304P-201ENST00000411374 106 ntBASIC2.25□□□□□ -2.05
CDH11P55287 AC243428.1-201ENST00000421099 264 ntBASIC2.25□□□□□ -2.05
CDH11P55287 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.25□□□□□ -2.05
CDH11P55287 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.25□□□□□ -2.05
CDH11P55287 RPS3P1-201ENST00000456781 192 ntBASIC2.25□□□□□ -2.05
CDH11P55287 SNORD19B-201ENST00000459623 84 ntBASIC2.25□□□□□ -2.05
CDH11P55287 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.25□□□□□ -2.05
CDH11P55287 FO393415.2-201ENST00000480085 343 ntBASIC2.25□□□□□ -2.05
CDH11P55287 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.25□□□□□ -2.05
CDH11P55287 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.25□□□□□ -2.05
CDH11P55287 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.25□□□□□ -2.05
CDH11P55287 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.25□□□□□ -2.05
CDH11P55287 AC109446.1-201ENST00000566172 220 ntBASIC2.25□□□□□ -2.05
CDH11P55287 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.25□□□□□ -2.05
CDH11P55287 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.25□□□□□ -2.05
CDH11P55287 MIR3117-201ENST00000584034 78 ntBASIC2.25□□□□□ -2.05
CDH11P55287 MIR3616-201ENST00000584070 92 ntBASIC2.25□□□□□ -2.05
CDH11P55287 AC013412.1-201ENST00000610687 192 ntBASIC2.25□□□□□ -2.05
CDH11P55287 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.25□□□□□ -2.05
CDH11P55287 MTND4LP32-201ENST00000636111 270 ntBASIC2.25□□□□□ -2.05
CDH11P55287 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDH11P55287 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CDH11P55287 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.24□□□□□ -2.05
CDH11P55287 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
CDH11P55287 U3.13-201ENST00000364804 214 ntBASIC2.24□□□□□ -2.05
CDH11P55287 SNORA29-201ENST00000384183 140 ntBASIC2.24□□□□□ -2.05
CDH11P55287 RNU6-1297P-201ENST00000384415 104 ntBASIC2.24□□□□□ -2.05
CDH11P55287 Y_RNA.504-201ENST00000384481 104 ntBASIC2.24□□□□□ -2.05
CDH11P55287 Y_RNA.533-201ENST00000384596 114 ntBASIC2.24□□□□□ -2.05
CDH11P55287 RNU6-310P-201ENST00000384655 107 ntBASIC2.24□□□□□ -2.05
CDH11P55287 MIR95-201ENST00000385072 81 ntBASIC2.24□□□□□ -2.05
CDH11P55287 RNY4P36-201ENST00000391116 96 ntBASIC2.24□□□□□ -2.05
CDH11P55287 MTCYBP4-201ENST00000401524 249 ntBASIC2.24□□□□□ -2.05
CDH11P55287 EIF1AXP1-201ENST00000419267 435 ntBASIC2.24□□□□□ -2.05
CDH11P55287 AC092427.1-202ENST00000430569 476 ntBASIC2.24□□□□□ -2.05
CDH11P55287 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.24□□□□□ -2.05
CDH11P55287 AL513124.1-201ENST00000450410 614 ntBASIC2.24□□□□□ -2.05
CDH11P55287 MTCO3P10-201ENST00000455912 772 ntBASIC2.24□□□□□ -2.05
CDH11P55287 ELOCP24-201ENST00000456370 334 ntBASIC2.24□□□□□ -2.05
CDH11P55287 SNRPGP7-201ENST00000469016 106 ntBASIC2.24□□□□□ -2.05
CDH11P55287 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH11P55287 AC023141.11-201ENST00000508864 202 ntBASIC2.24□□□□□ -2.05
CDH11P55287 HMGB3P3-201ENST00000510526 400 ntBASIC2.24□□□□□ -2.05
CDH11P55287 RNA5SP82-201ENST00000516707 92 ntBASIC2.24□□□□□ -2.05
CDH11P55287 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.24□□□□□ -2.05
CDH11P55287 AC027176.1-201ENST00000560204 514 ntBASIC2.24□□□□□ -2.05
CDH11P55287 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH11P55287 AC093249.1-201ENST00000567049 203 ntBASIC2.24□□□□□ -2.05
CDH11P55287 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.24□□□□□ -2.05
CDH11P55287 MIR3136-201ENST00000583498 78 ntBASIC2.24□□□□□ -2.05
CDH11P55287 RPL30P11-203ENST00000598995 310 ntBASIC2.24□□□□□ -2.05
CDH11P55287 AC069294.1-201ENST00000608397 350 ntBASIC2.24□□□□□ -2.05
CDH11P55287 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH11P55287 AC243829.7-201ENST00000633081 225 ntBASIC2.24□□□□□ -2.05
CDH11P55287 SNORD98-201ENST00000636377 67 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms